CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 3
Query:    6 FEPKISDFGLAR-LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            FE K++DFGL+R  +   +TH+ST V G     GY+ PEY RT   T K DVYSFG +LLE++T     + ++     K ++ EW+  + + G +Q  +D  L        +++ +++A +C L      RPTM +V
Sbjct:  715 FEAKLADFGLSRSFLIEGETHVSTVVAGT---PGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSRE----KPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSC-LNHSSARRPTMSQV 843          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 48/143 (33.57%), Postives = 73/143 (51.05%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +  K++DFG +R +    TH +T ++G    +GYV PEY ++   T K DVYSFG +L EL+TG++P  + +  +     L E         +L D ID  +       ++    KVA  C L +  K+RP M EV+  L  I
Sbjct:  591 YRAKVADFGTSRSVTIDQTHWTTVISGT---VGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIVA-LAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKC-LSSKGKKRPNMREVFTELERI 728          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 55/167 (32.93%), Postives = 84/167 (50.30%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEEL 515
            K+SDFG +R +    THL+T V G FG   YV PEY ++   T K DVYSFG VL+EL+TGE+P++  ++ E     L     +     ++ D +D  +  +   +++     +A  C L    K+RP M EV   L  I   ++   +  I +  D  + D   EL
Sbjct:  556 KVSDFGTSRSVTIDQTHLTTQVAGTFG---YVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEE--NRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRC-LNRKGKKRPNMREVSIELEMIRSSHY---DSGIHIEDDDEEDDQAMEL 713          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 54/157 (34.39%), Postives = 79/157 (50.32%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV---YQFLRAIGERYHFTTEDE 467
            +  K+SDFG +R +    THL+T V G FG   Y+ PEY  +   T K DVYSFG VL+EL+TGE+P +  ++ E     L     +     ++ D ID  +  +    ++    K+A  C L    K RP M EV    + +R+  E     TE+E
Sbjct:  566 YRAKVSDFGTSRSVTLDQTHLTTLVAGTFG---YMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEE--GRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKC-LNRKGKNRPNMKEVSNELERIRSSPEDLDVRTENE 716          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            K++DFG +RL+      L+T V G    LGY+ PEY  T +   K DVYSFG VL+EL++G++     + P+T K ++V + A  +   +L + ID  ++ +    E+ +  ++A  C   T  +ERP M EV   L A+
Sbjct:  550 KVADFGASRLIPMDKEDLATMVQGT---LGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKAL-CFERPQTSK-HIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLT-GEERPGMKEVAAELEAL 683          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.217e-13
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNP-IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 428
            F+ K++DFGL+R  +   ++H+ST   G  G  GY+ PEY RT   T K DVYSFG VLLE++T +     A        ++ E +  + +   +   +D  L+ +     + + LK+A +CV P+ P  RP M  V Q L+
Sbjct:  710 FQAKLADFGLSRSFSVGEESHVST---GVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANE----NRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPS-PVARPDMSHVVQELK 843          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.217e-13
Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            +  KISDFG +R +    THL+T V G FG   Y+ PEY  +   T K DVYSFG VL+EL+TGE+P +  ++ E     L  +  +     +  D ID  +  K    ++    K+A  C L     +RP M EV
Sbjct:  565 YRAKISDFGTSRSVATDQTHLTTLVAGTFG---YMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGI--GLATYFLEAMKENRAVDIID--IRIKDESKQVMAVAKLARRC-LNRKGNKRPNMREV 692          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12
Identity = 52/137 (37.96%), Postives = 69/137 (50.36%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            F  K++DFGL++    +D TH+ST V G FG   Y+ PEY R    T K DVYSFG VL E++   RP      P     NL EW  +    GQL   ID+ L      + L +F +    C L     +RP+M +V
Sbjct:  621 FMAKVADFGLSKTGPELDQTHVSTAVKGSFG---YLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPVIDPTLPREMV-NLAEWAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKC-LADYGVDRPSMGDV 751          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            EPK++DFG+AR+     +   T      G  GY++PEY      + K DVYSFG ++LE+++G+R +N  +  E+ K NLV +  +    G   + +D  L      NE+F+ + +A  CV    P++RP +  +   L
Sbjct:  459 EPKVADFGMARIFRVDQSRADT--RRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGK-NLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCV-QNDPEQRPNLSTIIMML 593          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12
Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI+DFG+AR+     T   T      G  GY++PEYA     + K DVYSFG ++LE+++G + +++ +  E+  GNLV +  +L S G   + +D         +E+ + + +A  CV     ++RPTM  + Q L
Sbjct:  465 PKIADFGMARIFGMDQTEAMT--RRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESV-GNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQED-AEDRPTMSSIVQML 598          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
Y5182_ARATH6.291e-1335.04Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH6.291e-1333.57Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLB_ARATH6.291e-1332.93Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLA_ARATH6.291e-1334.39Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAK4_ARATH6.291e-1335.00Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y5169_ARATH8.217e-1334.51Probable LRR receptor-like serine/threonine-protei... [more]
WAKLC_ARATH8.217e-1336.76Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
HERK_ARATH1.073e-1237.96Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK33_ARATH1.073e-1232.37Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH1.073e-1233.33Cysteine-rich receptor-like protein kinase 19 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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