CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 3
Query:   15 KISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            +++DFGL+ ++ P D  T LS       G LGY+ PEY R    T K DVYSFG VLLE+++G +  ++    +  +GN+VEW   L   G +   +D  L        L +   VAC CV     K+RP+M +V
Sbjct:  649 RVADFGLS-ILGPADSGTPLSEL---PAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDM----QFEEGNIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMR-GKDRPSMDKV 774          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12
Identity = 53/149 (35.57%), Postives = 74/149 (49.66%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG-NLVEWIAQLSSTGQLQDAIDKCLVAKGVDNEL--------FQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            FE  ++DFGLA+ +  +D   S  ++   G  GY+APEYA TL    K DVYSFG VLLEL+ G++P       E  +G ++V W+   ++  ++    D  +V   VD  L            K+A  CV       RPTM EV   L
Sbjct:  829 FEAHVADFGLAKFL--VDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVG-----EFGEGVDIVRWVR--NTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCV-EEEAAARPTMREVVHML 967          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.402e-12
Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG------ERYHFTTEDE 467
            K+SDFG +R +    THL+T V+G    +GY+ PEY ++   T K DVYSFG VL EL+TGE+  +  ++ E     L  +        +L D ID  +      N++    K+A  C L    ++RP+M +V   L  I       + Y + +E+E
Sbjct:  574 KVSDFGTSRTVTVDHTHLTTVVSGT---VGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQE--YRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKC-LNMKGRKRPSMRQVSMELEKIRSYSEDMQPYEYASENE 724          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.402e-12
Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +  K+SDFG +R +    THL+T V+G    +GY+ PEY ++   T K DVYSFG VL+EL+TGE+  +  ++ E     L  +        +L D ID  +    + +++    KVA  C L    ++RP+M EV   L +I
Sbjct:  585 YRAKVSDFGTSRTVTVDHTHLTTVVSGT---VGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQE--NRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKC-LNLKGRKRPSMREVSMELDSI 721          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.402e-12
Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 3
Query:   18 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLV--AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADI 503
            I+D+GL+RLM       +T V    G LGY APE+++   A+ K DVYS G ++LEL+TG+ P        T   +L +W+A +       +  D  L+   + V +EL   LK+A +CV P+ P  RP   +V + L  I       TE         G  D+
Sbjct:  677 IADYGLSRLMTAA---AATNVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSP-----GEPTNGMDLPQWVASIVKEEWTNEVFDLELMRETQSVGDELLNTLKLALHCVDPS-PAARPEANQVVEQLEEIRPETEVETETTPFGSGGEGGKDL 831          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.402e-12
Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 437
            PK++DFG+ARL N  +T   T  +   G  GY+APEY R    + K DVYSFG +LLE+++GE+  N     ET       W   +   G+L+  ID  L  +   NE+ + +++   CV     K RPTM  V  +L   G
Sbjct:  479 PKVADFGMARLFNMDETRGET--SRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNF----ETEGLPAFAWKRWIE--GELESIIDPYL-NENPRNEIIKLIQIGLLCVQENAAK-RPTMNSVITWLARDG 610          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.830e-12
Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTED-EIMLPSDSGDADILE 509
            K+SDFG +R +    THL+T V G FG   Y+ PEY  +   T K DVYSFG VL+EL+TGE+P +  ++ E     L     +     ++ D ID  +  +   ++L    K+A  C L     +RP M E    L    ER   + ED E  + +D  +  ++E
Sbjct:  572 KVSDFGTSRSVTIDQTHLTTMVAGTFG---YMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEE--GRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKC-LSRKGIKRPNMREASLEL----ERIRSSPEDLEAHIENDDEEDQVME 727          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.830e-12
Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            K++DFG +RL+      L+T V G    LGY+ PEY  T +   K DVYSFG VL+EL++GE+     + P++ K +LV +        +L + ID  ++ +    E+ +  ++A  C    + +ERP+M EV   L A+
Sbjct:  548 KVADFGASRLIPMDQEQLTTMVQGT---LGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKAL-CFERPQSSK-HLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECT-RIMGEERPSMKEVAAELEAL 681          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.830e-12
Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD-----AIDKCLVAKGVDNEL----FQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            EP I DFGLAR+++      +T      G  GY+APE A   V + + DVYS+G VLLELVTG+R  +    PE    N+V W+  + S+ + +D      +D  LV + +D +L     Q   +A  C     P+ RP+M +V + L
Sbjct:  934 EPHIGDFGLARILDDSTVSTATVT----GTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALD-RSFPEDI--NIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKLREQAIQVTDLALRCT-DKRPENRPSMRDVVKDL 1073          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.830e-12
Identity = 42/138 (30.43%), Postives = 74/138 (53.62%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI+DFG+AR+     T  +T      G  GY++PEY      + K DVYSFG ++LE+++G++ ++  +  +    NLV ++ +L     L + +D  +       E+ +++ +   CV    P +RPTM  ++Q L
Sbjct:  478 PKIADFGMARIFGVDQTVANT--GRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQM-DGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQEN-PADRPTMSTIHQML 611          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CRI4_MAIZE1.073e-1237.04Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
CLV1_ARATH1.073e-1235.57Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
WAKLJ_ARATH1.402e-1233.12Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLH_ARATH1.402e-1234.97Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
IMK2_ARATH1.402e-1232.93Probably inactive leucine-rich repeat receptor-lik... [more]
CRK36_ARATH1.402e-1236.62Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
WAKLE_ARATH1.830e-1233.73Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAK5_ARATH1.830e-1234.29Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
PEPR2_ARATH1.830e-1235.81Leucine-rich repeat receptor-like protein kinase P... [more]
CRK18_ARATH1.830e-1230.43Cysteine-rich receptor-like protein kinase 18 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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