CX296263

Overview
NameCX296263
Unique NameCX296263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9358 contig Ccv1_Contig9358:734..1394. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.361e-18
Identity = 69/215 (32.09%), Postives = 103/215 (47.91%), Query Frame = 1
Query:   22 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEML-KQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC 660
            +P D+D+Y TTA+N  ESS+  Y          E  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN S+ + K+  +QG    +++  P  L P   + +    D  L  +    K     + K+S++L  QI   +  R  ++ S+  I  +L G   G      +  R +    D  C +  V  F THC
Sbjct:  200 LPDDIDVYATTAANPNESSYACYYD-------EERSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKSISTMKVMQFQGMKHRASS--PISLPPVTHLDLTPSPDVPLTIL--KRKLLRTNNMKESQVLVGQIQHLLDARHIIEKSVQKIVSLLAG--FGETAQKHLSERAMLTAHD--CHQEAVTHFRTHC 392          
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.851e-17
Identity = 61/213 (28.64%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   22 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC 660
            +P D+++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QYQ VK  T+        SHVM+YGN S+ + KL  +QG     A+ P +     ++ +    +  L  M     +  +  E +  ++++I   +  R  ++ S+  I  ++ G    +  ++ + ++  PL +   C ++ V  F +HC
Sbjct:  198 LPPDINVYATTAANPRESSYACYYD-------EQRSTFLGDWYSVNWMEDSDVEDLTKETLHKQYQLVKSHTNT-------SHVMQYGNKSISAMKLMQFQGL-KHQASSPISLPAVSRLDLTPSPEVPLSIMKRKLMSTNDLQESR-RLVQKIDRHLEARNIIEKSVRKIVTLVSG---SAAEVDRLLSQRAPLTEH-ACYQTAVSHFRSHC 390          
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.417e-17
Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 1
Query:   22 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC 660
            +P D+++Y TTA+N +ESS+  Y          E  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN S+ + K+  +QG    +++  P  L P   + +    D  L  +        +  E ++ ++ QI + +  R  ++ S+  I  +L G   G      +  R +    D  C +  V  F THC
Sbjct:  200 LPDDINVYATTAANPKESSYACYYD-------EERGTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKSISTMKVMQFQGMKHRASS--PISLPPVTHLDLTPSPDVPLTILKRKLLRTNDVKESQN-LIGQIQQFLDARHVIEKSVHKIVSLLAG--FGETAERHLSERTMLTAHD--CYQEAVTHFRTHC 392          
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 7.033e-17
Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 1
Query:    1 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYL--YQGF-DPASANFPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMI 534
            GS+F+ ++P +L IY TTA+N+ E S+ T+C        P   TCL DLYS  W+ DS+TH+L + T+ QQY+ VK  T         SHV  YG+T  +  KLY+  +QG  D +S+      ++P     +  RD  L  + H        +E KS +++ +   ++ R  ++ ++ +I
Sbjct:  195 GSMFQQILPSNLSIYATTAANSTECSYSTFCGD------PTITTCLADLYSYNWIVDSQTHHLTQRTLDQQYKEVKRETDL-------SHVQRYGDT--RMGKLYVSEFQGSRDKSSSENDEPPMKPRHS--IASRDIPLHTL-HRQIMMTNNAEDKSFLMQILGLKLKRRDLIEDTMKLI 357          
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16
Identity = 64/223 (28.70%), Postives = 106/223 (47.53%), Query Frame = 1
Query:    1 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYL--YQGF-DPASANFPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC 660
            GS+F G++P D++IY TTA+   ESS+ T+C        P   +CL DLYS  W+ DSE H L + T+ QQY+ VK  T+        SHV  YG+   K  KLYL  +QG    AS       ++P     +  RD  L  + H     A     K+ ++K +   ++ R  +  ++++I   +F   + +            + +   C++ + + F++ C
Sbjct:  189 GSMFAGLLPTDINIYATTAARPDESSYATFCDD------PRISSCLADLYSYDWIVDSEKHQLTQRTLDQQYKEVKFETNL-------SHVQRYGDK--KMGKLYLSEFQGSRKKASTEHDEPPMKPKDS--IPSRDIPLHTL-HRRIMMANNMNDKTLLMKILGLKLKRRDLIKDTMEVIDQFMFNVKQPN--------SNATIDETMDCIEVVYKEFQSKC 385          
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.559e-16
Identity = 63/214 (29.44%), Postives = 103/214 (48.13%), Query Frame = 1
Query:   22 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC 660
            +P ++++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN ++ + K+  +QG    +++  P  L P   + +    D  L  M     N  +  E+  ++ ++I + +  R  ++ S+  I  +L   +     L S  A   PL     C    +  F THC
Sbjct:  198 LPDNINVYATTAANPRESSYACYYD-------EKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKTISTMKVMQFQGMKHKASS--PISLPPVTHLDLTPSPDVPLTIMKRKLMNTND-LEESRQLTEEIQQHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERA---PLTGH-SCYPEALLHFRTHC 390          
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.776e-16
Identity = 63/214 (29.44%), Postives = 102/214 (47.66%), Query Frame = 1
Query:   22 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC 660
            +P ++++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN ++ + K+  +QG    +++  P  L P   + +    D  L  M     N  +  E+  ++ ++I   +  R  ++ S+  I  +L   +     L S  A   PL     C    +  F THC
Sbjct:  198 LPDNINVYATTAANPRESSYACYYD-------EKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKTISTMKVMQFQGMKHKASS--PLSLPPVTHLDLTPSPDVPLTIMKRKLMNTND-LEESRQLTEEIQRHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERA---PLTGH-SCYPEALLHFRTHC 390          
BLAST of CX296263 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.016e-15
Identity = 63/214 (29.44%), Postives = 102/214 (47.66%), Query Frame = 1
Query:   22 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC 660
            +P ++++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN ++ + K+  +QG    +++  P  L P   + +    D  L  M     N  +  E+  ++ ++I   +  R  ++ S+  I  +L   +     L S  A   PL     C    +  F THC
Sbjct:  198 LPDNINVYATTAANPRESSYACYYD-------EKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKTISTMKVMQFQGMKRKASS--PVPLPPVTHLDLTPSPDVPLTIMKRKLMNTND-LEESRQLTEEIQRHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERA---PLTGH-SCYPEALLHFRTHC 390          
The following BLAST results are available for this feature:
BLAST of CX296263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
LGMN_RAT6.361e-1832.09Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_BOVIN1.851e-1728.64Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
LGMN_MOUSE2.417e-1730.37Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
HGLB_SCHMA7.033e-1732.60Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
HGLB_SCHJA2.672e-1628.70Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]
LGMN_PONAB4.559e-1629.44Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_MACFA7.776e-1629.44Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_HUMAN1.016e-1529.44Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05138A10SK FerrChloL1 Citrus clementina cDNA clone C05138A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296263 ID=CX296263; Name=CX296263; organism=Citrus clementina; type=EST; length=661bp
GGTAGCATTTTTGAAGGTGTAATGCCCAAAGATCTAGATATATATGTCAC
TACTGCATCAAATGCACAAGAGAGCAGCTTTGGGACTTATTGCCCTGGAA
TGGATCCTTCTCCACCTCCAGAGTACATCACTTGCTTGGGGGATTTGTAC
AGTGTTGCTTGGATGGAGGACAGTGAGACTCACAATTTGAAGAGAGAGAC
CATAAGTCAACAGTATCAAGCTGTGAAGGAACGGACTTCCAATTTTAACA
ATTACAATTCTGGATCTCATGTGATGGAATATGGGAACACAAGCGTCAAA
TCAGAGAAGCTATACTTGTATCAAGGTTTCGATCCTGCCAGCGCCAACTT
TCCTCCGAACAAGCTTCAGCCTGATCAAATGGGAGTTGTCAACCAGAGAG
ACGCAGATCTTCTCTTCATGTGGCATATGTACAAAAATGCAGCAGAGGGA
TCAGAAAAGAAATCAGAAATGCTTAAGCAGATTACAGAGACAATGAGGCA
CAGAAAACACTTAGATGCAAGTATTGATATGATTGGAGTAATTTTATTTG
GACCAGATAAGGGTTCTAGAATTCTTAATTCCGTTGGAGCACGTGGCCTG
CCTCTTGTTGATGACTGGCAATGCCTGAAATCAATGGTTCGTGTTTTCGA
GACTCACTGTG
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