CX296269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.774e-19 Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 QDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.742e-18 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 QDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 31 QDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.888e-18 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 151 QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.572e-16 Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 2 Query: 23 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 32 DKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.682e-16 Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 2 Query: 23 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 32 DKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.928e-12 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 166 ++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGG I Sbjct: 31 EEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 ++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 31 EEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 ++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 31 EEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 ++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 31 EEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CX296269 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 20 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 157 ++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 31 EEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 The following BLAST results are available for this feature:
BLAST of CX296269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296269 ID=CX296269; Name=CX296269; organism=Citrus clementina; type=EST; length=198bpback to top |