CX296290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRC11_ORYSJ (Putative glutaredoxin-C11 OS=Oryza sativa subsp. japonica GN=GRXC11 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.743e-14 Identity = 50/118 (42.37%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 243 DVVSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDAL--EMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 ++V+ + SE AV+VF K GCCM V LL L + V+E+D D L EM GS R PAVFIGG L GG ++MA H+ GEL+P+LK A ALWL Sbjct: 3 EMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDR--------DPLGKEMEKELARRLYGSSG---RGGPAVPAVFIGGSLVGGTSKVMAMHLKGELVPLLKSAGALWL 109
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRXC2_ORYSJ (Putative glutaredoxin-C2 OS=Oryza sativa subsp. japonica GN=GRXC2 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14 Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 249 VSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 V+ + S+ AV++F C M HVVK L LG + V+EVD+ + V AL +V + PAVFIGGKL G D++M+ H+ G+L+P+L+EA ALWL Sbjct: 5 VARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG--------------RTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGALWL 104
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRC10_ORYSJ (Glutaredoxin-C10 OS=Oryza sativa subsp. japonica GN=GRXC10 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.653e-14 Identity = 46/115 (40.00%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 249 VSSMVSENAVIVFAKRGCCMSHVVKRLLLG-LGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 V+ + SE AV+VF C M H V LL+G LG N V+E+D+ D ++ E+ G PAVF+GG L GG +R+M+ H+ GEL+P+LK A ALWL Sbjct: 4 VAKLASERAVVVFTASNCGMCHAVTSLLVGELGVNAAVHELDK-DPRGRDMER-ELARRLNGGGGGGR--------ALPAVFVGGNLVGGANRVMSLHLAGELVPMLKNAGALWL 108
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRC12_ORYSJ (Putative glutaredoxin-C12 OS=Oryza sativa subsp. japonica GN=GRXC12 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13 Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 3 Query: 243 DVVSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 ++V+ + SE AV+VF K GCCM V LL L + V+E+D + +E + G R PAVFIGG L GG ++M H+ GEL+P+LK A ALWL Sbjct: 3 EMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDR----EPLGKEMERELARRLYGSGG-----RGGPAVPAVFIGGSLVGGTSKVMTVHLKGELVPMLKSAGALWL 109
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 234 NTTDVVSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 +T + ++SE+ VI+F++ CCM HV+KRLL +G P V E+D+ + +S+ AL+ G PAVFIG + GGL+ ++A H++G+L+P L + ALW+ Sbjct: 37 STEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDD-HEVSSLPTALQDEYSGGVSVVGPP----------PAVFIGRECVGGLESLVALHLSGQLVPKLVQVGALWV 144
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRC13_ORYSJ (Glutaredoxin-C13 OS=Oryza sativa subsp. japonica GN=GRXC13 PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13 Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 3 Query: 243 DVVSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 ++V+ + SE AV+VF K GCCM V LL L + V+E+D + +E + G R PAVFIGG L G ++MA H+ GEL+P+LK A ALWL Sbjct: 3 EMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDR----EPLGKEMERELARRLYGSGG-----RGGPAVPAVFIGGSLVGSTSKVMAMHLKGELVPMLKNAGALWL 109
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRXS1_ARATH (Putative monothiol glutaredoxin-S1 OS=Arabidopsis thaliana GN=GRXS1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13 Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 249 VSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 +S+++ + V++F+K CCMSH +K L+ G GAN VYE+DE + + AL + K PAVFIG +L GG +++M+ + +L +L+ A A+W+ Sbjct: 4 ISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELGC---------------KPTVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRC11_ARATH (Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 249 VSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALWL 590 + + S+ A ++F K CCM H +K L LGA+P ++E+D+ + + AL + GS + PAVF+GG+ G I++ H+ G L +LK+AKA+WL Sbjct: 4 IRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRAL--------GSSNP------AVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRC10_ARATH (Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = 3 Query: 165 PFDPLSHSSVSTSSKRAVRGPSINTTDV--VSSMVSENAVIVFAK-RGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKALW 587 P P + S+VS+S+ T + ++SE+ VI+F + CCM HV+K+LL +G +P V E+D+G+ ++A P +FIGG GG + ++A H++G+LIP L E ALW Sbjct: 28 PLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLAVEAA------------------------PVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147
BLAST of CX296290 vs. ExPASy Swiss-Prot
Match: GRXS9_ARATH (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12 Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 243 DVVSSMVSENAVIVFAKRGCCMSHVVKRLLLGLGANPCVYEVDEGDDEASVLDALEMIVXXXXXXXGSHDDRDRQKVQFPAVFIGGKLFGGLDRIMATHITGELIPVLKEAKA 581 D V M SE V++F+K CCMS+ V+ L LG +P V+E+D+ + + AL + PA+F+GGKL G + +M+ H++G L+P++K +A Sbjct: 2 DKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLGC---------------STPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQA 99 The following BLAST results are available for this feature:
BLAST of CX296290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296290 ID=CX296290; Name=CX296290; organism=Citrus clementina; type=EST; length=630bpback to top |