CX296321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_BACAN (50S ribosomal protein L1 OS=Bacillus anthracis GN=rplA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.048e-19 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 268 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 543 PNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 138 PNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_BACAH (50S ribosomal protein L1 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplA PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.048e-19 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 268 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 543 PNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 138 PNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_BACAC (50S ribosomal protein L1 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.048e-19 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 268 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 543 PNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 138 PNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_BACAA (50S ribosomal protein L1 OS=Bacillus anthracis (strain A0248) GN=rplA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.048e-19 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 268 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 543 PNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 138 PNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_STAHJ (50S ribosomal protein L1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rplA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT ++ +A+EE K GKVEYRA+K GIVH GK FS++ L+ NF + KP AKG Y+KS + ++MGP ++++ Sbjct: 138 PNPKTGTVTMDVKKAVEEIKAGKVEYRAEKAGIVHASIGKVSFSDEKLVENFKTLQDVLAKAKPSSAKGTYFKSVAVTTTMGPGVKID 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_OCEIH (50S ribosomal protein L1 OS=Oceanobacillus iheyensis GN=rplA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19 Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = -3 Query: 277 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 543 PNPK GTVT + +A+ + K GKVEYR DK+ +H+P GK F + L+ NF+A + + KP+ +KG+Y K+A I S+MGP I++++ Sbjct: 138 PNPKTGTVTFEVEKAVNDIKAGKVEYRVDKSANIHVPIGKISFDDQKLVDNFVALTEQLVKVKPQSSKGIYMKNASITSTMGPGIKVDV 226
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_GEOSF (50S ribosomal protein L1 OS=Geobacter sp. (strain FRC-32) GN=rplA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 268 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 543 PNPK GTVT ++ +A+ E K GKVE+R +K GI+H P GK F D L N LA I ++ +KP AKG Y K + S+MGP + L++ ++ Sbjct: 137 PNPKVGTVTFDVGRAVNESKSGKVEFRVEKAGIIHAPVGKVSFETDKLKENILALIDALVKSKPSAAKGTYIKKISVSSTMGPGVNLDVSDV 228
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOTE (50S ribosomal protein L1 OS=Clostridium tetani GN=rplA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19 Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +A+ + K GKVEYR DKT I+H+ GK F + L NF + +I KP AKG Y KS + S+MGP +++N ++LD Sbjct: 136 PNPKSGTVTFDVAKALNDIKAGKVEYRVDKTAIIHVVIGKKSFGPEKLKDNFRVLMDAIIKAKPSAAKGQYLKSVSVSSTMGPGVKINPSKVLD 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_SYMTH (50S ribosomal protein L1 OS=Symbiobacterium thermophilum GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.611e-19 Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT ++ AI+E K GKVEYR DK GIV P GKA F + L NF A +++ KP AKG Y KS I ++MGP I++N Sbjct: 138 PNPKTGTVTFDVANAIQEIKAGKVEYRTDKAGIVAAPIGKASFDVERLAANFRALTEALLRAKPAAAKGQYMKSVTISATMGPGIKVN 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_RICAH (50S ribosomal protein L1 OS=Rickettsia akari (strain Hartford) GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.611e-19 Identity = 44/89 (49.44%), Postives = 62/89 (69.66%), Query Frame = -3 Query: 277 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 543 PNPK GTVT +I AI+ K G+VEYRA+K+GI+H GK FS+ DLL N A I+++ KP G KG Y K+ Y+ S+MG S+++++ Sbjct: 147 PNPKLGTVTLDIKNAIKNAKSGQVEYRAEKSGIIHAGLGKLSFSDQDLLKNLNAFIEAVIKAKPSGLKGSYLKAMYLSSTMGASVQIDL 235 The following BLAST results are available for this feature:
BLAST of CX296321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296321 ID=CX296321; Name=CX296321; organism=Citrus clementina; type=EST; length=545bpback to top |