CX296321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_LACDB (50S ribosomal protein L1 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rplA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT + +A++ K G+VEYR D+ +H GK F+E+ L NF A +I KP AKG Y KS + ++ GP I+L+ Sbjct: 138 PNPKTGTVTMDTAKAVQNVKAGQVEYRVDRQASIHTAIGKVSFTEEQLTENFRALQNAILRAKPASAKGQYIKSCAVAATFGPGIKLD 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_LACDA (50S ribosomal protein L1 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=rplA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT + +A++ K G+VEYR D+ +H GK F+E+ L NF A +I KP AKG Y KS + ++ GP I+L+ Sbjct: 138 PNPKTGTVTMDTAKAVQNVKAGQVEYRVDRQASIHTAIGKVSFTEEQLTENFRALQNAILRAKPASAKGQYIKSCAVAATFGPGIKLD 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_DESDG (50S ribosomal protein L1 OS=Desulfovibrio desulfuricans (strain G20) GN=rplA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PN K GTVT ++ +A+ E K G+VE++ DK G++H P GK F + N A + +++ KP AKG Y K+ + ++MGP +++ Sbjct: 138 PNAKTGTVTFDVAKAVSEVKAGRVEFKVDKAGVLHAPLGKVSFGPQKIAENLKALLDTVQRLKPSSAKGTYMKTMSVSTTMGPGFKVD 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_DESDA (50S ribosomal protein L1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=rplA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = -3 Query: 268 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 543 PN K G+VT ++ +A+ E K G+V+++ DK G++H P GKA F + +L N A + ++ KP AKG Y S I ++MGP ++++ ++ Sbjct: 138 PNAKTGSVTFDVAKAVSELKAGRVDFKVDKAGVLHAPLGKASFGPEKILGNLKALLDTVNRLKPSSAKGTYLISMAISTTMGPGFKVDMTQV 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CHLPN (50S ribosomal protein L1 OS=Chlamydia pneumoniae GN=rplA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = -3 Query: 265 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 543 P PK GTVTT++ +AI E +KGK+E++AD+ G+ ++ GK F + N A ++ KP AKG Y S I S+MGP I ++ +E++ Sbjct: 138 PTPKTGTVTTDVAKAISELRKGKIEFKADRAGVCNVGVGKLSFESSQIKENIEALSSALIKAKPPAAKGQYLVSFTISSTMGPGISIDTRELM 230
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_ALISL (50S ribosomal protein L1 OS=Aliivibrio salmonicida (strain LFI1238) GN=rplA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT N+ QA++ K G+V YR DK GI+H GK DF L N + + +++ KP AKGV+ K I ++MG + L+ Sbjct: 138 PNPKVGTVTPNVAQAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDGAQLKENLESLLVALKKAKPTSAKGVFLKKVSISTTMGAGVSLD 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_ACTSZ (50S ribosomal protein L1 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rplA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15 Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT N+ +A++ K G+V YR DK GI+H GKA FSE+ L N A + ++ +P AKG++ K + ++ G ++++ Sbjct: 138 PNPKVGTVTPNVAEAVKNAKSGQVRYRNDKNGIIHTTIGKASFSEEQLKENLQALLAALAKARPTTAKGIFIKKVSVSTTQGAGVQVD 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_YERE8 (50S ribosomal protein L1 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rplA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.853e-15 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF + L N + + +++ KP AKGVY K + ++MG + ++ Sbjct: 138 PNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSEKLKENLESLVVALKRAKPATAKGVYIKKISLSTTMGAGVAID 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_VIBCM (50S ribosomal protein L1 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rplA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.853e-15 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT N+ +A++ K G+V YR DK GI+H GK F D L N A + +++ KP AKGV+ K I ++MG + ++ Sbjct: 138 PNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVTFEADQLKENLEALLVALKKAKPSSAKGVFVKKVSISTTMGAGVAVD 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_VIBCH (50S ribosomal protein L1 OS=Vibrio cholerae GN=rplA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.853e-15 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK GTVT N+ +A++ K G+V YR DK GI+H GK F D L N A + +++ KP AKGV+ K I ++MG + ++ Sbjct: 138 PNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVTFEADQLKENLEALLVALKKAKPSSAKGVFVKKVSISTTMGAGVAVD 225 The following BLAST results are available for this feature:
BLAST of CX296321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296321 ID=CX296321; Name=CX296321; organism=Citrus clementina; type=EST; length=545bpback to top |