CX296321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOBL (50S ribosomal protein L1 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GK+ F E+ L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 136 PNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKSSFGEEKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOBK (50S ribosomal protein L1 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GK+ F E+ L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 136 PNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKSSFGEEKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOBJ (50S ribosomal protein L1 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GK+ F E+ L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 136 PNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKSSFGEEKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOBH (50S ribosomal protein L1 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GK+ F E+ L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 136 PNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKSSFGEEKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOB6 (50S ribosomal protein L1 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GKA F E L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 136 PNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKASFGEGKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOB1 (50S ribosomal protein L1 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +AI + K GKVEYR DKT I+H+P GK+ F E+ L NF ++++ KP AKG Y KS I S+MGP I++N ++L+ Sbjct: 136 PNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIIHVPIGKSSFGEEKLSDNFHVLMEAVVKAKPAAAKGQYIKSVAISSTMGPGIKINPGKVLE 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOAB (50S ribosomal protein L1 OS=Clostridium acetobutylicum GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 262 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 543 PNPK+GTVT ++ +A+ E K GKVEYR DKT IVH+P GK+ F + L NF A + +I KP AKG Y KS + S+MGP I++N ++LD Sbjct: 136 PNPKSGTVTFDVAKALTEIKAGKVEYRVDKTAIVHVPVGKSSFGAEKLKQNFHALMDAIVKAKPASAKGQYVKSVALSSTMGPGIKINPVKVLD 229
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_AQUAE (50S ribosomal protein L1 OS=Aquifex aeolicus GN=rplA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.677e-20 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = -3 Query: 265 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 543 P+PK GTVTTN+ QAI++ K+G+VE++ DK G VH+P GK F ++ L+ N AAI ++ KP GAKG Y K+ + +M PS++L+I E+L Sbjct: 142 PSPKTGTVTTNVEQAIKDAKRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQYIKNMAVSLTMSPSVKLDINEVL 234
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_THETN (50S ribosomal protein L1 OS=Thermoanaerobacter tengcongensis GN=rplA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK+GTVT + +A++E K GK+EYR DK GI+H+P GK F ++ LL NF + +I +KP AKG Y KS + S+MGP +++N Sbjct: 138 PNPKSGTVTFEVEKAVKEAKAGKIEYRIDKAGIIHVPIGKKSFGKEKLLENFRTVMDAIIKSKPAAAKGQYIKSVVLSSTMGPGVKVN 225
BLAST of CX296321 vs. ExPASy Swiss-Prot
Match: RL1_CLOD6 (50S ribosomal protein L1 OS=Clostridium difficile (strain 630) GN=rplA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20 Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 280 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAIKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 543 PNPK+GTVT ++ +AI+E K GKVEYR DKT I+H+P GK F + L NF A + +I KP AKG Y +S + SSMGP +++N Sbjct: 139 PNPKSGTVTFDVAKAIDEIKAGKVEYRLDKTNIIHVPVGKVSFGGEKLTENFTALMDAIIKAKPAAAKGQYLRSITVASSMGPGVKIN 226 The following BLAST results are available for this feature:
BLAST of CX296321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296321 ID=CX296321; Name=CX296321; organism=Citrus clementina; type=EST; length=545bpback to top |