CX296329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296329 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 44/131 (33.59%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 272 RSLSQVLNFMDQMTESPFF-------SGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR------XXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEER 625 R++ Q+++ MD++ E SGT G +R WD + ++ + + DMPGL KEDV+VS+E + LVI+ + Y +R+ LP+ + + D+IKAE+KNGVL +++PK + E++ Sbjct: 100 RTMRQMIDTMDRLFEDTMTFPGRNRASGT-GEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVK-DKIKAELKNGVLFISIPKTEVEKK 228
BLAST of CX296329 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12 Identity = 43/125 (34.40%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 272 RSLSQVLNFMDQMTESPFFSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRR-----YTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEE 619 RS+ Q+L+ MD++ E R G +R W+ K+ + + + DMPG+ KEDV+VS+E + LVI+ R Y +R+ LP+ + +++KAE+K+GVL +T+PK K E Sbjct: 100 RSMRQMLDTMDRIFEDAITIPGRNIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSCYDTRLKLPDNCEK-EKVKAELKDGVLYITIPKTKIE 223
BLAST of CX296329 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 45/137 (32.85%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 272 RSLSQVLNFMDQMTE--------SPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR-----------XXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEER 625 R++ Q+L+ MD++ + +P S G +R WD E D + + DMPGL +E+V+V +E + LVIR SV Y R+ LP++ ++ +++AE+KNGVL VTVPK + E + Sbjct: 98 RTMRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKS-KVRAELKNGVLLVTVPKTEVERK 233 The following BLAST results are available for this feature:
BLAST of CX296329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296329 ID=CX296329; Name=CX296329; organism=Citrus clementina; type=EST; length=695bpback to top |