CX296349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACDB_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=mmgC PE=2 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.467e-25 Identity = 59/166 (35.54%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 164 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 661 Q+ ++ V FAR+ IAP A +++++ FP L K MG L GI P++ + +A+ EISR S +VG+ H+++ N ++ G+ QK KY+P L SG+H+GA A++EP++GSD ++ A + +G Y++NG+K++ TNG A + +A T Sbjct: 7 QVMMRKMVRDFARKEIAPAAEIMEKTDEFP--FQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAADIYITFALT 170
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACDA_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=acdA PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25 Identity = 61/163 (37.42%), Postives = 94/163 (57.67%), Query Frame = 2 Query: 176 KESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 664 ++ V FA+ +AP AA+ D+ F D L++ M N L GI P++ + IA+EE+S+ S G++ AH +LC L G+ QK +YL +L GE +GA A++E +GSD MK A+R+ Y++NG+K++ TNG VA +V+A TD Sbjct: 13 RKLVRDFAKHEVAPTAAERDEQERF--DRELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTD 173
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: FADE_BACSU (Probable acyl-CoA dehydrogenase OS=Bacillus subtilis GN=fadE PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.678e-21 Identity = 62/173 (35.84%), Postives = 84/173 (48.55%), Query Frame = 2 Query: 152 FDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTD 664 F D ++ + +++ P I+ ++ F V L K G L G P+E + E+ SRA GS LSYGAH + +V GS QK KYLP L SGE + A A++EP +GSD +G K A + G Y++ G K W TN A VVYAK D Sbjct: 30 FTDEHKMIAKTTEDYIEQDVLPHIDDIE-NHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRA-GSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVD 200
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACADS_PONAB (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 55/174 (31.61%), Postives = 85/174 (48.85%), Query Frame = 2 Query: 143 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 664 S+ +T ++ FA + + P AA++D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ GS QK K++ SG+ +G A+SEP GSD A +++NG K W TN A VV+A TD Sbjct: 31 SVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFP--AAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTD 202
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACADS_MOUSE (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 53/174 (30.46%), Postives = 87/174 (50.00%), Query Frame = 2 Query: 143 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 664 S+ +T +++ FA + + P AA++D+ + FP K MG L + P+E + IA+EEISRA S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A TD Sbjct: 31 SVELPETHQMLRQTCRDFAEKELVPIAAQLDREHLFP--TAQVKKMGELGLLAMDVPEELSGAGLGYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSAQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTD 202
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACADS_RAT (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20 Identity = 52/174 (29.89%), Postives = 87/174 (50.00%), Query Frame = 2 Query: 143 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 664 S+ +T +++ FA + + P AA++D+ + FP + K MG L + P+E + IA+EEISR S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A TD Sbjct: 31 SVELPETHQMLRQTCRDFAEKELVPIAAQLDKEHLFP--TSQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTD 202
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACADS_BOVIN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADS PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20 Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 2 Query: 143 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG-GYIINGNKMWCTNGPVAQTLVVYAKTD 664 S+ +T +++ FA + + P AA++D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ G+ QK +++ SG+ +G A+SEP GSD G R DG ++++G K W TN A +VV+A TD Sbjct: 31 SVELPETHQMLRQTCRDFAEKELFPIAAQVDKEHRFP--AAQVKKMGELGLMAMNVPEELSGAGLDYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFALSEPGNGSD-AGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTD 202
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACADS_PIG (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADS PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.571e-19 Identity = 54/174 (31.03%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 143 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 664 S+ +T +++ FA + + P AA++D+ + FP+ K MG L + P+E + IAMEEISR S G+ ++ L + +++ GS QK +++ SG+ VG A+SEP GSD A ++++G K W TN A VV+A TD Sbjct: 31 SVELPETYQMLRQTCRDFAEKELVPIAAQVDKEHRFPEAQV--KKMGELGLMAMDVPEELSGAGLDYLAYTIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTD 202
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACADM_DROME (Probable medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.051e-19 Identity = 63/180 (35.00%), Postives = 92/180 (51.11%), Query Frame = 2 Query: 134 SSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAH-SNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 664 + TS + QLQ +E +F RE I P AA+ D+S +P + W+L G N H P + C++ EE+ A G G+ S L ++ G+ QK KYL +L+ V A ++EP AGSDV G+K +A++ ++ING KMW TNG VA V A+T+ Sbjct: 31 NGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWEL-GLMNNH---IPADIGGLDLDVFTTCLSAEEL--AYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTN 204
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACAD9_HUMAN (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo sapiens GN=ACAD9 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.051e-19 Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = 2 Query: 80 RSLCASFFTKKQKHSAAFSSTSLLFDDTQL--QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG--GYIINGNKMWCTNGPVAQTLVVYAKTDI 667 R+ F K K F + D+ QF V +F E + R KIDQ P D L KL + L G+ P+E + + EI GS+ ++ AH + + ++ G+ QK KYLPKL SGEH+ A ++EP +GSD ++ +A + YI+NG+K+W TNG +A V+AKT++ Sbjct: 37 RAFAKELFLGKIKKKEVFPFPEVSQDELNEINQFLGPVEKFFTEEVDSR--KIDQEGKIP-DETLEKLK-SLGLFGLQVPEEYGGLGFSNTMYS-RLGEIISMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEV 231 The following BLAST results are available for this feature:
BLAST of CX296349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296349 ID=CX296349; Name=CX296349; organism=Citrus clementina; type=EST; length=674bpback to top |