CX296419

Overview
NameCX296419
Unique NameCX296419
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX296419 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 3 
Query:  210 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI 389
            Y+G+R R WGK+ AEIR+P K  +R+WLG+Y +   AA AY  A F +RG  A LNFP  I
Sbjct:  107 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRI 167
The following BLAST results are available for this feature:
BLAST of CX296419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
ERF1_SOLLC8.024e-1152.46Ethylene-responsive transcription factor 1 OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionC05140F04SK FerrChloL1 Citrus clementina cDNA clone C05140F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296419 ID=CX296419; Name=CX296419; organism=Citrus clementina; type=EST; length=685bp
GAGGATAAAGTGGAGTCGTCTTAATTATTTTTGGGTTGGGCATCGGTATG
TGTCCCTCAGAACTCACAACAAGAAGAAAACTTTGATTAATTATCTACGA
AAACGACATGGAAGGAGGCGGGTGCTGCAGCACTTCGACTTCAACGAAAA
GCCCAGAGAAGCGGAAGCCAAGGCAGCAGCGGCAACACCAACAGCAGCAG
GAAAAGCCGTACAAGGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTCGC
TGAAATTAGAGAGCCTAACAAGAGATCCAGAATCTGGCTTGGTTCTTACA
CCACGCCTATAGCCGCCGCACGTGCCTACGACACGGCCGTCTTCTATCTC
CGGGGCCCTTCCGCTCGTCTTAACTTCCCCGAATTGATTTTCCAAGAAGA
CGATCTTCGAGACGTTTCTGCCGCTTCAATACGCAAGAAAGCTACCGAAG
TTGGCGCTAAGGTCGACGCTTTACAAGCTGCTCTCCATGCTGGTAATTCA
GAATCTGAATCCAATACCAATTCCAATTCCAATTCCAATTCTATTCGATT
GTCCGAGAAGCCTGATTTAAACAAGTTTCCAGAGAGTTCTGATGAAGATT
GATAACACAAAATACTTGCAAGCTCACAATTACCTACCCTAGCCTTTCCA
CGTTTACGTACTGTTTTATTCCCATCATCAGTTTC
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