CX296572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.318e-40 Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 55 MGRAPCCEKMGLKKGPWTPEEDRILIAHIKKHGHP-NWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 MGRAPCC+K +KKGPW+PEED L ++I+ G NW ALP++ GL RCGKSCRLRW+NYLRP+IK G FS+EEE I +L+ +G+RWS IAA+LPGRTDN+IKN W+T LKKK Sbjct: 1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.195e-39 Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 55 MGRAPCCEKMGLKKGPWTPEEDRILIAHIKKHGHP-NWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK-AAAVLKQNQKAXXXXXXXXXSDDHKQNSKATT 495 MGRAPCC+K +K+GPW+PEED L +I+K+G+ NW + P +AGL RCGKSCRLRW+NYLRP+IK G+FS+EE+ I +L +G+RWS IAA LPGRTDN+IKN W+T L+KK ++ + A S D K+ + TT Sbjct: 1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSSSSDSSSSAMASPYLNPISQDVKRPTSPTT 149
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.380e-38 Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 55 MGRAPCCEKMGLKKGPWTPEEDRILIAHIKKHGHP-NWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKAAAVL 414 MGRAPCC+K +K+GPW+PEED L +I+K G NW ALP +AGL RCGKSCRLRW+NYLRP+I+ G+F++EE+ I +L +G+RWS IAA L GRTDN+IKN W+T LKKK A + Sbjct: 1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIATM 121
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.440e-37 Identity = 65/103 (63.11%), Postives = 84/103 (81.55%), Query Frame = 1 Query: 91 KKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 KKG WT EED+IL+ ++K HG +W + K+ GL RCGKSCRLRW+NYL P++KRGNF+++EE+ II LH +LGNRWS IA R+PGRTDN++KN W+THL KK Sbjct: 17 KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 119
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.203e-36 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L +G WT ED+IL +I HG W LP QAGL RCGKSCRLRW NYLRP IKRGN S +EEE II LH++LGNRWS IA RLPGRTDNEIKN W+++L+K+ Sbjct: 14 LNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKR 117
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36 Identity = 64/103 (62.14%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKK 396 LKKGPWT ED IL+ ++KKHG NW A+ K GL RCGKSCRLRW N+LRP++K+G F+ EEE II LH +GN+W+ +AA LPGRTDNEIKN W+T +K+ Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36 Identity = 64/103 (62.14%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKK 396 LKKGPWT ED IL+ ++KKHG NW A+ K GL RCGKSCRLRW N+LRP++K+G F+ EEE II LH +GN+W+ +AA LPGRTDNEIKN W+T +K+ Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.909e-36 Identity = 63/103 (61.17%), Postives = 82/103 (79.61%), Query Frame = 1 Query: 91 KKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 KKG WT EED+IL+ +++ HG +W + K+ GL RCGKSCRLRW+NYL P++ RGNF+ +EE+ II LH +LGNRWS IA R+PGRTDN++KN W+THL KK Sbjct: 13 KKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 115
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 5.427e-35 Identity = 66/104 (63.46%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 ++KG W+PEED L HI +HG W ++P+ A L RCGKSCRLRWINYLRPD+KRG FS++EE+ I+ LH +LGNRWS IA+ LPGRTDNEIKN W++ +KKK Sbjct: 14 VRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKK 117
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.258e-35 Identity = 66/104 (63.46%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 +KKG W+PEED L+ ++ +G W + K AGL RCGKSCRLRWINYLRPD+KRG FS +EE+ II H +LGNRWS IAARLPGRTDNEIKN W++ +KK+ Sbjct: 18 MKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKR 121 The following BLAST results are available for this feature:
BLAST of CX296572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296572 ID=CX296572; Name=CX296572; organism=Citrus clementina; type=EST; length=741bpback to top |