CX296572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.616e-32 Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 55 MGRAPC-CEKMGLKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWH-----THLKKKAAAVL 414 M + PC + ++KGPWT EED ILI I HG W + + AGL R GKSCRLRW+NYLRPD++RGN + EE+ I+ LH GNRWS IA LPGRTDNEIKN W+ H+K+ A+ + Sbjct: 1 MDKKPCNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQAEASFI 126
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.787e-31 Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKA 402 ++KGPWT +ED L+ ++ G W + K +GL R GKSCRLRW+NYL P +KRG S EE I+ LH GNRWS IA RLPGRTDNEIKN W TH++KKA Sbjct: 8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKA 112
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31 Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKA 402 ++KGPWT +ED L+ ++ G W + K +GL R GKSCRLRW+NYL P +K G S +EE II LH GNRWS IA RLPGRTDNEIKN W TH++KKA Sbjct: 8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKA 112
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31 Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 76 EKMGLKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKA 402 ++ G +KGPWT +ED +L+ + G W + K +GL R GKSCRLRW+NYL P +KRG + +EE ++ LH GNRWS IA +LPGRTDNEIKN W TH++KKA Sbjct: 3 QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKA 111
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.082e-30 Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 91 KKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKA 402 +KGPWT +ED +L+ + G W + K +GL R GKSCRLRW+NYL P +KRG + +EE ++ LH GNRWS IA +LPGRTDNEIKN W TH++KKA Sbjct: 9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKA 112
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25 Identity = 49/101 (48.51%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 79 KMGLKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWH 381 K K W PEEDRIL ++ ++G W +PK+ GL SCR RW+N+L+P +K+G F+ EEE+ ++ LH +LGN+WS +A PGRTDNEIKN W+ Sbjct: 13 KKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWN 113
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24 Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L KGPWT EED +I +KK+G +W + KQ R GK CR RW N+L P++K+ ++++EE+ I H +LGNRW+ IA LPGRTDN +KN W++ +K+K Sbjct: 81 LVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRG-RMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23 Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L KGPWT EED+ +I H++K+G W + K R GK CR RW N+L P++K+ ++++EE+ I H LGNRW+ IA LPGRTDN +KN W++ +++K Sbjct: 19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRK 121
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23 Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L KGPWT EED+ +I +KK+G W + K R GK CR RW N+L P++K+ ++++EE+ I H +LGNRW+ IA LPGRTDN +KN W++ +K+K Sbjct: 81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBB_MOUSE (Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.129e-23 Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L KGPWT EED+ +I +KK+G W + K R GK CR RW N+L P++K+ +++EE+ I H +LGNRW+ IA LPGRTDN +KN W++ +K+K Sbjct: 81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRK 183 The following BLAST results are available for this feature:
BLAST of CX296572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296572 ID=CX296572; Name=CX296572; organism=Citrus clementina; type=EST; length=741bpback to top |