CX296572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB_MOUSE (Myb proto-oncogene protein OS=Mus musculus GN=Myb PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22 Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L KGPWT EED+ +I ++K+G W + K R GK CR RW N+L P++K+ ++++EE+ I H LGNRW+ IA LPGRTDN IKN W++ +++K Sbjct: 90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKG-RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192 HSP 2 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = 1 Query: 58 GRAPCCEKMGLKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLG-NRWSAIAARLPGRTDNEIKNVWHTHL 390 G P K L K WT EED L ++++G +W+ + R C+ RW L P++ +G ++KEE++ +I L G RWS IA L GR + + WH HL Sbjct: 28 GLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPN-RTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHL 138
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.174e-21 Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L KGPWT EED+ +I ++K+G W + K R GK CR RW N+L P++K+ ++++ E+ I H LGNRW+ IA LPGRTDN IKN W++ +++K Sbjct: 85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKG-RIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.214e-20 Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK-----AAAVLKQNQKA 432 L KGPW+ EED +I ++K+G W + + R GK CR RW N+L P I + +++EEE T+I H + GN+W+ + LPGR+DN IKN W++ +KKK A+ +L Q Q + Sbjct: 85 LVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPG-RIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYASGLLDQCQSS 203 HSP 2 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 94 KGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLG-NRWSAIAARLPGRTDNEIKNVWHTHL 390 KG WTPEED +L +++ NW+ + + R C RW L P++ +G +SKEE+ TII+L + G +WS I+ LPGR + + WH HL Sbjct: 35 KGQWTPEEDEVLCKAVERFQGKNWKKIA-ECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL 133
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20 Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 L KGPWT +ED ++I ++ G W + + R GK CR RW N+L P+IK+ ++++E+E I H LGN+W+ IA RLPGRTDN IKN W++ +++K Sbjct: 134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG-RIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK 236
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.874e-19 Identity = 49/116 (42.24%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 85 GLKKGPWTPEEDRILIAHIKKHGHPNWRALP-KQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKAAAVLKQNQK 429 G+ KGPW EED L+ + K G W ++ K G R GK CR RW N+L P++++ N++ EE++ II+ H LGN+W+AI+ L GR N IKN W++ L KK K K Sbjct: 274 GIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPG--RIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKIGGDSKSLNK 387
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18 Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 46 INKMGRAPCCEKMGLKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 + K GR+ KG WT EED L + + HG W+ + LR G+ CR RW N L P IKR ++ EE+ I++ H GN+W+ I+ LPGRT+ IKN W++ +K+K Sbjct: 741 LKKSGRSKSSSNESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLL-CLRNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRK 857
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17 Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 88 LKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKK 396 L KG WT +ED +I +K +G W + R GK CR RW N+L P+IK+ +S EE++ I + H + GN+W+ IA LPGRTDN IKN W++ +K+ Sbjct: 199 LVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKG-RMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR 300 HSP 2 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 35/100 (35.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 94 KGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLG-NRWSAIAARLPGRTDNEIKNVWHTHL 390 KG WT EED+ILI + H NW+ + + R C R+ L P++ +G ++K+E++ +I L G +WS IA L GR + + WH HL Sbjct: 149 KGKWTSEEDQILIKAVNLHNQKNWKKIAEHFP-DRTDVQCHHRYQKVLHPNLVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCRERWHNHL 247
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 103 WTPEEDRILIAHIKKHGHPNWRALPKQAG--LLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 W PEED IL+A+++++G W + ++ L R KSC RW NYLRP IK+G+ + +E+ +I L GN+W IAA +PGRT + W +K+ Sbjct: 12 WRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 112
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 103 WTPEEDRILIAHIKKHGHPNWRALPKQ--AGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 W PEED +L A+++++G W + ++ L R KSC RW NYLRP IK+G+ ++EE+ +I L GN+W IAA +PGRT + W +K+ Sbjct: 7 WRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 107
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16 Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 103 WTPEEDRILIAHIKKHGHPNWRALPKQAG--LLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKAAAVLKQNQK 429 W+ EED +L A++++ G W + ++ L R KSC RW NYL+P IK+G+ ++EE+ +I L + GN+W IAA +PGRT + W +K+ + N++ Sbjct: 7 WSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKR 117 The following BLAST results are available for this feature:
BLAST of CX296572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296572 ID=CX296572; Name=CX296572; organism=Citrus clementina; type=EST; length=741bpback to top |