CX296572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYB1_NEUCR (Myb-like DNA-binding protein myb-1 OS=Neurospora crassa GN=rca-1 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.044e-14 Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 91 KKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKAAAVLKQN 423 ++GPW+ ED+ LI +K G NW + + G R K CR RW L+P + G ++EE I+ D+ G RW+ IA +L GR+DN +KN W+ +K + +Q+ Sbjct: 8 RRGPWSAGEDQRLIKLVKDLGPGNWVNVARILGT-RTPKQCRERWHQNLKPGLNHGPMTQEEAAIIVREVDLKGPRWADIARKLQGRSDNAVKNYWNGLNNRKKNQLRRQS 117
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: MYBM_DICDI (Myb-like protein M OS=Dictyostelium discoideum GN=mybM PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11 Identity = 33/110 (30.00%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 85 GLKKGP--WTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKAAA 408 G+++ P WT EED+ L + +G W+ + + G + G C W L PDI++G + ++EEE ++ L + G+ W IA R+ RTD + + + L+ + A Sbjct: 62 GIRRSPNKWTEEEDQKLFQLVSIYGEKKWKRISAEMGGQKTGAQCAQHWKRVLSPDIRKGPWDEDEEELLLRLVNQHGSSWKKIAKRICKRTDIQCRYQYLKSLQSREVA 171
BLAST of CX296572 vs. ExPASy Swiss-Prot
Match: SNPC4_HUMAN (snRNA-activating protein complex subunit 4 OS=Homo sapiens GN=SNAPC4 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 85 GLKKGPWTPEEDRILIAHIKKHGHPNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEETIINLHDMLG-NRWSAIAARLPGRTDNEIKNVWHTHLKKK 399 GLKKG W PEED L+ + K+G +W + ++ R CR R++ L +K+G ++ +EEE +I L + G W+ IA+ LP R+ ++ + W + KK Sbjct: 398 GLKKGYWAPEEDAKLLQAVAKYGEQDWFKIREEVP-GRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIASELPHRSGSQCLSKWKIMMGKK 502 The following BLAST results are available for this feature:
BLAST of CX296572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296572 ID=CX296572; Name=CX296572; organism=Citrus clementina; type=EST; length=741bpback to top |