CX296622

Overview
NameCX296622
Unique NameCX296622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.023e-23
Identity = 51/148 (34.46%), Postives = 90/148 (60.81%), Query Frame = 3
Query:  234 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH-----PADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ++  + + +L   T++F    +IG G  G +Y  +L+ G    +K+L  S++ ++EF+A+++ +  +K+ N+V LLG+C+    R+L Y++ PNGSL+D+LH          G  + W +R+ IA+GAA+G  +LH    P IIHR+I
Sbjct:   52 AVPSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDI 199          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23
Identity = 56/132 (42.42%), Postives = 86/132 (65.15%), Query Frame = 3
Query:  291 NNIIGSGRTGTMYKALLEDGTPLMVKRLQDS-------QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT-GKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +NI+G G TGT+YKA + +G  + VK+L          +R +   +AE+  LG+V++RN+V LLG C  +   +L+Y++MPNGSL DLLH  D T   + +W     IAIG A+G  +LHH+C+P+I+HR++
Sbjct:  722 DNILGMGSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDL 853          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23
Identity = 58/137 (42.34%), Postives = 90/137 (65.69%), Query Frame = 3
Query:  258 DLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQ-DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADD-TGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ++ KATN+FSK+N+IG+G  G ++KA+LEDGT   +KR + ++ +   + + E+  L  V +R+LV LLG C+  +  LL+Y+ +PNG+L++ LH + D T K + W RRL IA   A G A+LH    P I HR++
Sbjct:  355 EITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDV 491          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23
Identity = 59/144 (40.97%), Postives = 92/144 (63.89%), Query Frame = 3
Query:  249 RLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCM----AKKERLLVYKHMPNGSLYDLLHPADDTGK-SVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ++ +L KATN+FS+ N IG G  G +YK +L DG+ + VK++ +S+ + + EF  E+  + ++K+RNLVPL G  M    ++ +R LVY +M NG+L D L P  +T K  + WP+R  I +  A+G A+LH+   P I HR+I
Sbjct:  284 KIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDI 427          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23
Identity = 59/175 (33.71%), Postives = 95/175 (54.29%), Query Frame = 3
Query:  147 KKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            + K  D + +   K +   K   V     ++    +SDL  ATNSFS +N++G G  G +Y+A  EDG  L VK++  S     +  +F   ++ +  + + N+  L G+C    + L+VY+   NGSL+D LH A++  K + W  R+ IA+G AR   +LH  C+P I+H+NI
Sbjct:  376 RHKSFDDDDSTMRKPIVAKKAAVV--VPSNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNI 548          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23
Identity = 54/148 (36.49%), Postives = 88/148 (59.46%), Query Frame = 3
Query:  231 KSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQ----DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +S  +  LSDL  AT +FS  N++G G  G +Y+A   DG  L VK++     DS +SE      + +L  ++++N+  L+G+C  +   +LVY++  NGSL++ LH +D   K + W  R+ IA+G AR   +LH  C+P ++H+NI
Sbjct:  387 RSAVEFELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEG-ITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNI 533          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 3
Query:  294 NIIGSGRTGTMYKALLEDGTPLMVKRL----------QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            N+IG G +G +Y+A +++G  + VK+L          + ++     F AE+ TLG+++++N+V  LG C  +  RLL+Y +MPNGSL  LLH  +  G S+DW  R  I +GAA+G A+LHH+C P I+HR+I
Sbjct:  790 NVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLH--ERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDI 920          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23
Identity = 68/199 (34.17%), Postives = 104/199 (52.26%), Query Frame = 3
Query:   99 VVGIVMFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKE-----------FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            VVGIVMF    R  +R  K      +KW                +S  K+  S+  +  +   + N+IG G +G +YK  L  G  + VK+L  S +   +           F AE+ TLG+++++++V L   C +   +LLVY++MPNGSL D+LH     G  + WP RL IA+ AA G ++LHH+C P I+HR++
Sbjct:  640 VVGIVMFIAKCR-KLRALKSSTLAASKW----------------RSFHKLHFSE-HEIADCLDEKNVIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDV 820          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.975e-23
Identity = 57/142 (40.14%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  243 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPAD-DTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ++R  DL  AT+ F K  IIG+G  GT++K  L +  P+ VK++  S R   +EFVAE+ +LG ++++NLV L G+C  K + LL+Y ++PNGSL  LL+     +G  + W  R  IA G A G  +LH     ++IHR++
Sbjct:  354 RLRYRDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDV 495          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.975e-23
Identity = 63/152 (41.45%), Postives = 92/152 (60.53%), Query Frame = 3
Query:  216 VSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            VSL E  I   RLS+L  AT+ F + N +G G  G +YKA+L DG  + VKR   +     + + F +E+  L  +++ N+V LLG+C    ERLLVY++MP+G+L+D LH        +DW  RL I + AARG  +LH+  +P IIHR++
Sbjct:  499 VSLGETKI--FRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLH---GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDV 645          
The following BLAST results are available for this feature:
BLAST of CX296622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
PTI1_SOLLC1.023e-2334.46Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y5148_ARATH1.336e-2342.42Probable leucine-rich repeat receptor-like protein... [more]
WAKLQ_ARATH1.336e-2342.34Wall-associated receptor kinase-like 20 OS=Arabido... [more]
Y1105_ARATH1.744e-2340.97Probable receptor-like protein kinase At1g11050 OS... [more]
SRF7_ARATH1.744e-2333.71Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
SRF5_ARATH1.744e-2336.49Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
RCH2_ARATH1.744e-2341.35Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
RLK5_ARATH2.278e-2334.17Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
LRKA1_ARATH2.975e-2340.14Lectin-domain containing receptor kinase A4.1 OS=A... [more]
ACCR2_ARATH2.975e-2341.45Serine/threonine-protein kinase-like protein CCR2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05146H12SK FerrChloL1 Citrus clementina cDNA clone C05146H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296622 ID=CX296622; Name=CX296622; organism=Citrus clementina; type=EST; length=665bp
GAGGCCTCGTGCCGAATTCGGCACGAGGGAACTTCAAGGGCCCTCACACT
GGAGTCATTGCTGGGGCAGCAATTGGCGGGGTGACTTTCGCAGCATTGGT
TGTGGGTATTGTTATGTTCTTCTATTTCCGTAGAATGTCTATGAGGAAGA
AGAAGGATGATGATCCTGAAGGAAACAAATGGGCGAAGAGCTTGACAGGA
GCCAAAGGCATTAAGGTTTCCTTGTTTGAGAAGTCAATTACTAAAATGAG
ATTAAGTGATCTCATGAAGGCTACCAACAGCTTCAGCAAAAACAATATTA
TTGGGTCAGGAAGAACTGGGACAATGTACAAAGCATTGCTTGAAGATGGC
ACGCCACTTATGGTAAAGAGGTTGCAGGATTCACAACGTTCTGAGAAAGA
ATTTGTGGCTGAGATGGCTACTCTGGGAAGTGTGAAAAATCGTAACTTAG
TTCCGCTTTTAGGTTTTTGCATGGCTAAGAAGGAGAGGCTTTTGGTTTAC
AAGCACATGCCAAATGGTAGCCTTTATGATCTTTTACATCCCGCTGATGA
CACTGGCAAGAGTGTGGATTGGCCACGGAGGCTCNAAATAGCTATAGGGG
CAGCTAGAGGATTTGCCTGGCTACATCATAACTGCAATCCTCTTATTATT
CACCGAAATATTAGC
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