CX296622

Overview
NameCX296622
Unique NameCX296622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.477e-22
Identity = 69/210 (32.86%), Postives = 109/210 (51.90%), Query Frame = 3
Query:   96 LVVGIVMFFYFRRMSMRKKKDDDPE----GNKW------------AKSLTGAKGIKVSLFEKSITKM----RLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            L++ I +  Y   ++ RK++   P+    G+ W             KS    K    S    + T +       ++M ATN F +++++G G  G +YK  LEDGT + VKR    S++   EF  E+  L  +++R+LV L+G+C  + E +LVY++M NG L   L+ AD     + W +RL I IGAARG  +LH   +  IIHR++
Sbjct:  428 LILLIAVCCYCCLVASRKQRSTSPQEGGNGHPWLPLPLYGLSQTLTKSTASHKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGAD--LPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDV 635          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.477e-22
Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 3
Query:  255 SDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKR------LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSV----DWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            S+L  AT +FS  N IGSG  G +Y+  L DG  + +KR      ++  Q  E  F +E+A L  + +++LV L+G+C  ++E+LLVY +M NG+LYD LH  ++  K       W  R+ IA+ AARG  +LH+   P IIHR+I
Sbjct:  487 SELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDI 632          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22
Identity = 71/196 (36.22%), Postives = 101/196 (51.53%), Query Frame = 3
Query:   99 VVGIVMFFYFRRMSMRKKKDDDPEGNK-WAKSLTGAKGIKV----SLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLM-VKRLQ-DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG-KSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +V + MF     + M+KKK   P  N  W     G          SL      +  + ++  ATN F    IIG G  G++YK  ++ G  L+ VKRL+  S +  KEF  E+  L  +++ +LV L+G+C    E +LVY++MP+G+L D L   D T    + W RRL I IGAARG  +LH      IIHR+I
Sbjct:  452 LVVLAMFVVGVLVIMKKKKKSKPSTNSSWCPLPHGTDSTNTKPAKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDI 647          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22
Identity = 58/196 (29.59%), Postives = 110/196 (56.12%), Query Frame = 3
Query:   96 LVVGIVMFFYFRRMSMRKKKDDDPE--GNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKERLLVYKHMPNGSL-YDLLHPADDTG---KSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            L + +V+    RR + ++  +D P+  G    +   GA+   +S    + +      L++AT  F+  N+I  G +G +++  LE+G P+++K++   +   + +++E+       ++ LVP LG C+  + ++ LVYK M +G L   L   +++ G   KS+DW  RL IA+GAA G ++LHH C+P ++HR++
Sbjct:  466 LPIILVLCMRHRRRAAQRGNNDRPKPAGEASQQPPKGAQTFDLSRLGNAFS---YEQLLQATEEFNDANLIKRGHSGNLFRGFLENGIPVVIKKIDVREGKSEGYISELELFSKAGHQRLVPFLGHCLENESQKFLVYKFMRHGDLASSLFRKSENEGDGLKSLDWITRLKIALGAAEGLSYLHHECSPPLVHRDV 658          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22
Identity = 55/145 (37.93%), Postives = 88/145 (60.69%), Query Frame = 3
Query:  234 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRN 659
            S T   ++ L + TN+FS+ NIIG G  G +Y+A L  G  L VK+L ++    +S+ EF+  ++ +  +K  +++ LLG+C    +RLLVY++ PNGSL D LH      K + W  R+ IA+GA++   +LH  C P ++H+N
Sbjct:  481 SATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQN 625          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.519e-22
Identity = 67/190 (35.26%), Postives = 102/190 (53.68%), Query Frame = 3
Query:  117 FFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLS--DLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            F+Y RR   +  K  D        SL      ++    +S T ++ S  ++ KATN+FS++NIIG G  G ++K  L DGT +  KR ++ S   +  F  E+  + S+++ NL+ L G+C A       +R++V   + NGSL+D  H   D    + WP R  IA+G ARG A+LH+   P IIHR+I
Sbjct:  233 FWYCRRKKSKLLKPRDT-------SLEAGTQSRLDSMSESTTLVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHD--HLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDI 413          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 70/190 (36.84%), Postives = 98/190 (51.58%), Query Frame = 3
Query:   96 LVVGIVMFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEK-EFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ++ G+VMF   +R   RK+  DD E       L G   +K  +F         S+L  AT  F  +N +G G  G +YK  L DG  + VK L    R  K +FVAE+  + SV +RNLV L G C   + R+LVY+++PNGSL   L    D    +DW  R  I +G ARG  +LH   +  I+HR++
Sbjct:  650 ILAGVVMFTIRKR---RKRYTDDEE-------LLGMD-VKPYIFT-------YSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALF--GDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDV 819          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 3
Query:  258 DLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL---QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPAD-DTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +L +AT  FS+++ +G G    ++K +L DGT + VKR     D ++S KEF  E+  L  + + +L+ LLG+C    ERLLVY+ M +GSLY  LH  D +  K ++W RR+ IA+ AARG  +LH    P +IHR+I
Sbjct:  497 ELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDI 635          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22
Identity = 71/199 (35.68%), Postives = 108/199 (54.27%), Query Frame = 3
Query:   96 LVVGIVMFF---------YFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +++G + FF         +F + S RK+K  + +  +           K  +  +S+     ++L  AT+SFS  + IG G  G +YK  L  G  + VKR  Q S + +KEF  E+  L  + +RNLV LLG+C  K E++LVY++MPNGSL D L  +    + +    RL IA+G+ARG  +LH   +P IIHR+I
Sbjct:  566 IIIGAIAFFLVLSSLALVFFIKRSKRKRKTREVDMEQEHPLP------KPPMNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDAL--SARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDI 756          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22
Identity = 60/191 (31.41%), Postives = 107/191 (56.02%), Query Frame = 3
Query:  114 MFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRS-------EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNIS 665
            +F  FR+ + + ++  D E        +G + + +  F+    K+R  +++KAT  F    +IG+G  G +YKA L +   + VK+L ++  S       ++EF+ E+  L  +++RN+V L GFC  ++   LVY++M  GSL  +L   DD  K +DW +R+ +  G A   +++HH+ +P I+HR+IS
Sbjct:  730 IFICFRKRTKQIEEHTDSE--------SGGETLSIFSFDG---KVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNAI-MAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLE-NDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDIS 907          
The following BLAST results are available for this feature:
BLAST of CX296622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
THE1_ARATH1.477e-2232.86Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
ACCR3_ARATH1.477e-2240.41Putative serine/threonine-protein kinase-like prot... [more]
Y5900_ARATH1.929e-2236.22Putative receptor-like protein kinase At5g39000 OS... [more]
Y2165_ARATH1.929e-2229.59Probable LRR receptor-like serine/threonine-protei... [more]
SUB_ARATH1.929e-2237.93Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
RKF3_ARATH2.519e-2235.26Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH4.297e-2236.84Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE4.297e-2241.73Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5374_ARATH5.611e-2235.68Probable LRR receptor-like serine/threonine-protei... [more]
Y4885_ARATH5.611e-2231.41Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05146H12SK FerrChloL1 Citrus clementina cDNA clone C05146H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296622 ID=CX296622; Name=CX296622; organism=Citrus clementina; type=EST; length=665bp
GAGGCCTCGTGCCGAATTCGGCACGAGGGAACTTCAAGGGCCCTCACACT
GGAGTCATTGCTGGGGCAGCAATTGGCGGGGTGACTTTCGCAGCATTGGT
TGTGGGTATTGTTATGTTCTTCTATTTCCGTAGAATGTCTATGAGGAAGA
AGAAGGATGATGATCCTGAAGGAAACAAATGGGCGAAGAGCTTGACAGGA
GCCAAAGGCATTAAGGTTTCCTTGTTTGAGAAGTCAATTACTAAAATGAG
ATTAAGTGATCTCATGAAGGCTACCAACAGCTTCAGCAAAAACAATATTA
TTGGGTCAGGAAGAACTGGGACAATGTACAAAGCATTGCTTGAAGATGGC
ACGCCACTTATGGTAAAGAGGTTGCAGGATTCACAACGTTCTGAGAAAGA
ATTTGTGGCTGAGATGGCTACTCTGGGAAGTGTGAAAAATCGTAACTTAG
TTCCGCTTTTAGGTTTTTGCATGGCTAAGAAGGAGAGGCTTTTGGTTTAC
AAGCACATGCCAAATGGTAGCCTTTATGATCTTTTACATCCCGCTGATGA
CACTGGCAAGAGTGTGGATTGGCCACGGAGGCTCNAAATAGCTATAGGGG
CAGCTAGAGGATTTGCCTGGCTACATCATAACTGCAATCCTCTTATTATT
CACCGAAATATTAGC
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