CX296631

Overview
NameCX296631
Unique NameCX296631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MPKC_ASPCL (Mitogen-activated protein kinase mpkC OS=Aspergillus clavatus GN=mpkC PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = -1
Query:  242 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-----LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 670
            VSTR+YRAPE++L    +    D+WS GCIL E+  G+ LF   +++    ++  +LG  P  ++                    +  TS+++M+ V  L       L  ++ +  D    D IDLL+ +L  DP  R+ A++ALRHP+
Sbjct:  174 VSTRYYRAPEIMLTWQRYGVQVDIWSAGCILAEMLRGKPLFPGKDHVHQFHLITNILGNPPKSVL--------------------EKITSKNTMKFVQSLPSREPRDLSTIVPKDTDF---DAIDLLKKMLVIDPDIRVSAQDALRHPY 299          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 51/152 (33.55%), Postives = 70/152 (46.05%), Query Frame = -1
Query:  242 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 676
            YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +   LG P P  M      V        KY        +PD     DS               +H    A    DLL  +L  DPA+R+   +AL+HP+
Sbjct:  223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 51/152 (33.55%), Postives = 70/152 (46.05%), Query Frame = -1
Query:  242 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 676
            YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +   LG P P  M      V        KY        +PD     DS               +H    A    DLL  +L  DPA+R+   +AL+HP+
Sbjct:  223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---------------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: HOG1_COCHE (Mitogen-activated protein kinase HOG1 OS=Cochliobolus heterostrophus GN=HOG1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 41/145 (28.28%), Postives = 73/145 (50.34%), Query Frame = -1
Query:  242 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 670
            VSTR+YRAPE++L    ++   D+WS GCI  E+  G+ LF   +++   +++  +LG  P  ++                        S +++R V  L  R    +     ++  D +DLL+ +L +DP +R++A +AL HP+
Sbjct:  174 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVI--------------------QTICSENTLRFVQSLPKRERQPLANKFKNAEPDAVDLLENMLVFDPRKRVRAEQALAHPY 298          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: HOG1_CANAL (Mitogen-activated protein kinase HOG1 OS=Candida albicans GN=HOG1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 46/148 (31.08%), Postives = 71/148 (47.97%), Query Frame = -1
Query:  242 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH----VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 670
            VSTR+YRAPE++L    ++   DLWSVGCIL E+  G+ LF   +++   +++  +LG  P  ++                    D   S +++R V  L     +          H   + IDLL  LL +DP +R+ A E L HP+
Sbjct:  177 VSTRYYRAPEIMLTWQKYDTEVDLWSVGCILAEMIEGKPLFPGKDHVHQFSIITELLGSPPADVI--------------------DTICSENTLRFVQSLPHRDPIPFSERFASCTHVEPEAIDLLAKLLVFDPKKRISAVEGLTHPY 304          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: HOG1_ARXAD (Mitogen-activated protein kinase hog1 OS=Arxula adeninivorans GN=hog1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 40/144 (27.78%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  242 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 670
            VSTR+YRAPE++L    ++   D+WS GCI  E+  G+ LF   +++   +++  +LG  P  ++                 +      + + ++++ K  R+P  + Q   ++  D +DLL+ +L +DP +R+ A +AL HP+
Sbjct:  174 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLRGKPLFPGKDHVHQFSIITELLGNPPDDVI-----------------ETIGSENTLNFVKSLPKRERIP--LSQKFPNADPDAVDLLEKMLVFDPRKRINAADALAHPY 298          
The following BLAST results are available for this feature:
BLAST of CX296631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
MPKC_ASPCL8.165e-1130.87Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MK10_RAT8.165e-1133.55Mitogen-activated protein kinase 10 OS=Rattus norv... [more]
MK10_HUMAN8.165e-1133.55Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
HOG1_COCHE8.165e-1128.28Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
HOG1_CANAL8.165e-1131.08Mitogen-activated protein kinase HOG1 OS=Candida a... [more]
HOG1_ARXAD8.165e-1127.78Mitogen-activated protein kinase hog1 OS=Arxula ad... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05801A10SK FerrChloL1 Citrus clementina cDNA clone C05801A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296631 ID=CX296631; Name=CX296631; organism=Citrus clementina; type=EST; length=688bp
TTTTGGGGGATACCTTCAATTACCATTATAGTGCCGAAAGAAACGAAACA
AGACAGGTGGGTGCAGAAACATAAATTTTACTATACAAACAGCAATGTAT
AAAAAAGAGACAATAGAATATCATTCACCACGTGCATGGCTGTGTATTAT
TTCTTTTCTAAAATTGAACAAGCTCGTCAATAGCAAAGACGAGGCTTTGC
AATTACAAGGGAAAGCCACACCTTCTCACATCTCTCGTGAAGAAAGGATG
TCTTAGGGCTTCCCTGGCTTTGAGCCGCTCTGCTGGATCATATCGGAGGA
GCCCCTGAAGGAGATCAATCAAATCACCGGCAGAGTGATCTACATGCTGC
ATTATCAGGTTCGGGAGACGGAGAAGTTTCCAAACTGCCCTCATGCTATC
TCTCGAAGTTGCACCATCAGGCCAATCCAGTCGTGCACCTCTCCTAAAAT
ATTTCTCAGCACGGCGGTCAGCTCTTATCACCATATGGTGGGGGAGAGGC
CCTAAAACCCTCTCCATCATGGCAAGATGCTCTAAATTCTCGTGCGTTTG
AAAAAGAGCCTCGCCGGAGCAAAGTTCTATAAGAATGCAACCCACACTCC
ACAAATCACAAGGATAATTCCATCCAAGGCCTAAAATAACCTCTGGTGCA
CGATAATGTCGTGTTGATACAACATAGCTGTGATCCTG
back to top