CX296631

Overview
NameCX296631
Unique NameCX296631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 48/151 (31.79%), Postives = 76/151 (50.33%), Query Frame = -1
Query:  239 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 682
            +++ V T  YR+PEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WP+  + +D  S    WK    P  +  HV +   + +DLL  +L YDPA+R+  + AL HP+F
Sbjct:  160 YTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKSTFPKWK----PGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYF 287          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: PRP4B_PONAB (Serine/threonine-protein kinase PRP4 homolog OS=Pongo abelii GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 49/161 (30.43%), Postives = 78/161 (48.45%), Query Frame = -1
Query:  227 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW--PDGATSRDSMRAVWKLLRLPNLIMQHVD---------HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 676
            Y+VS R YRAPE+I+G  ++Y  D+WSVGC L EL +G+ LF    N   L +   + G +P+ M IR     +++F       +   D  T R+ +  +  +    +L+   +               L DLL  +L  DPA+R+   +AL+H F    +
Sbjct:  849 YLVS-RFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKM-IRKGVFKDQHFDPNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 1007          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MK14_PANTR (Mitogen-activated protein kinase 14 OS=Pan troglodytes GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = -1
Query:  233 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 670
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L  + R+ G  P +++ R                      S ++   +  L ++P +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct:  183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAYLINR--------------------MPSHEARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MBK2_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis elegans GN=mbk-2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = -1
Query:  233 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-----RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP--NLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 670
            + +R YRAPEVILG  +  P D+WS+GCIL EL +G  L    +  + LA++  +LG  P   +  A R      ++ Y R       PDG+      R+    +R P  +        + GD   +D L+  L +DP  R+   +AL+H +  R
Sbjct:  622 IQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSKGYPRYCTATSMPDGSVVLAGARSKRGKMRGPPASRSWSTALKNMGDELFVDFLKRCLDWDPETRMTPAQALKHKWLRR 776          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MBK2_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis briggsae GN=mbk-2 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = -1
Query:  233 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-----RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP--NLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 670
            + +R YRAPEVILG  +  P D+WS+GCIL EL +G  L    +  + LA++  +LG  P   +  A R      ++ Y R       PDG+      R+    +R P  +        + GD   +D L+  L +DP  R+   +AL+H +  R
Sbjct:  621 IQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSKGYPRYCTATSMPDGSVVLAGARSKRGKMRGPPESRSWSTALKNMGDELFVDFLKRCLDWDPETRMTPAQALKHKWLRR 775          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: DYR1A_XENLA (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus laevis GN=dyrk1a PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 47/161 (29.19%), Postives = 81/161 (50.31%), Query Frame = -1
Query:  233 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW-----PDGAT--SRDSMRAVWKLLRLPN-----LIMQHVDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFTR 670
            + +R YR+PEV+LG  ++   D+WS+GCIL+E+ +GE LF     ++ ++ +  VLG  P H++ +A  +A K+F +     W      DG         R +  +L + N            H+  D +   D++  +L YD   R++   AL+H FF +
Sbjct:  314 IQSRFYRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMSKIVEVLGIPPAHILDQAP-KARKFFEKMPEGTWNLKKTKDGKKEYKPPGTRKLHNILGVENGGPGGRRAGESGHTVADYLKFKDVILRMLDYDAKTRIQPYYALQHSFFKK 473          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 48/150 (32.00%), Postives = 78/150 (52.00%), Query Frame = -1
Query:  239 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR-AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 682
            +++ + T  YRAPEV+LG   ++   D+WSVGCI  EL + +A+F     L+ L  + R+LG  P+  V                  WP  +  +D      WK L L   +  ++D +    +DLL  +L Y+PA+R+ A++A+ HP+F
Sbjct:  180 YTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELVTKQAIFAGDSELQQLLRIFRLLGT-PNEEV------------------WPGVSKLKDWHEYPQWKPLSLSTAV-PNLDEAG---LDLLSKMLEYEPAKRISAKKAMEHPYF 306          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = -1
Query:  239 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 670
            V+TR YRAPE+++G   +  P D+W+VGC+  EL SG  L+    +++ L ++ + LG L P H  + +  +    F  G  +  P      +        L+ PNL  Q         + L++G LR DPAERL   + L  P+F
Sbjct:  162 VATRWYRAPELLVGDTQYGPPVDVWAVGCVFAELLSGAPLWPGKSDVDQLYLIRKTLGELIPRHQQVFSTNQ----FFSGVCVPEPQEMEPLE--------LKYPNLSYQ--------ALSLMKGCLRMDPAERLSCEQLLEQPYF 287          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = -1
Query:  239 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV--WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 682
            +++ V T  YR+PEV+LG   ++ P D+WS+G I  EL + + LF     ++ L  + R LG  P++ V                  WP+  + +D       WK    P  +  HV +   + +DLL  +L YDPA+R+  + AL HP+F
Sbjct:  160 YTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGT-PNNEV------------------WPEVESLQDYKNTFPKWK----PGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYF 287          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 44/156 (28.21%), Postives = 72/156 (46.15%), Query Frame = -1
Query:  242 DHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 685
            +H Y   + TR YRA EV++G G+  P D+WS  C+  EL +G+ LF+ H+      + +HLA +  +LG +P  +  +     E + + G  L               W L  +     +     A      L+ +L +D  +R  A+ AL+HPF
Sbjct:  756 NHHYTDDIQTRQYRALEVLIGSGYGPPADIWSTACMAFELATGDYLFEPHQGDNYSRDEDHLAHISELLGAIPPSIYKKGKHWREFFHKNGHLL--------HIHQLKPWSLYEVLRQKYEWSHEDAQQFESFLRPMLDFDQEKRSTAKIALKHPF 903          
The following BLAST results are available for this feature:
BLAST of CX296631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
CDC2_BOVIN5.654e-1231.79Cell division control protein 2 homolog OS=Bos tau... [more]
PRP4B_PONAB7.385e-1230.43Serine/threonine-protein kinase PRP4 homolog OS=Po... [more]
MK14_PANTR7.385e-1229.73Mitogen-activated protein kinase 14 OS=Pan troglod... [more]
MBK2_CAEEL7.385e-1231.61Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEBR7.385e-1231.61Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_XENLA7.385e-1229.19Dual specificity tyrosine-phosphorylation-regulate... [more]
CKB22_ARATH7.385e-1232.00Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDKL1_DANRE7.385e-1232.19Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDC2_PONAB7.385e-1231.13Cell division control protein 2 homolog OS=Pongo a... [more]
SPK1_CAEEL9.645e-1228.21Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionC05801A10SK FerrChloL1 Citrus clementina cDNA clone C05801A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296631 ID=CX296631; Name=CX296631; organism=Citrus clementina; type=EST; length=688bp
TTTTGGGGGATACCTTCAATTACCATTATAGTGCCGAAAGAAACGAAACA
AGACAGGTGGGTGCAGAAACATAAATTTTACTATACAAACAGCAATGTAT
AAAAAAGAGACAATAGAATATCATTCACCACGTGCATGGCTGTGTATTAT
TTCTTTTCTAAAATTGAACAAGCTCGTCAATAGCAAAGACGAGGCTTTGC
AATTACAAGGGAAAGCCACACCTTCTCACATCTCTCGTGAAGAAAGGATG
TCTTAGGGCTTCCCTGGCTTTGAGCCGCTCTGCTGGATCATATCGGAGGA
GCCCCTGAAGGAGATCAATCAAATCACCGGCAGAGTGATCTACATGCTGC
ATTATCAGGTTCGGGAGACGGAGAAGTTTCCAAACTGCCCTCATGCTATC
TCTCGAAGTTGCACCATCAGGCCAATCCAGTCGTGCACCTCTCCTAAAAT
ATTTCTCAGCACGGCGGTCAGCTCTTATCACCATATGGTGGGGGAGAGGC
CCTAAAACCCTCTCCATCATGGCAAGATGCTCTAAATTCTCGTGCGTTTG
AAAAAGAGCCTCGCCGGAGCAAAGTTCTATAAGAATGCAACCCACACTCC
ACAAATCACAAGGATAATTCCATCCAAGGCCTAAAATAACCTCTGGTGCA
CGATAATGTCGTGTTGATACAACATAGCTGTGATCCTG
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