CX296631

Overview
NameCX296631
Unique NameCX296631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MPKC_ASPOR (Mitogen-activated protein kinase mpkC OS=Aspergillus oryzae GN=mpkC PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = -1
Query:  242 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS-AGDLIDLLQGLLRYDPAERLKAREALRHPF 670
            VSTR+YRAPE++L    +    D+WS GCIL E+  G+ LF   +++    ++  VLG  P  +V +                     TS ++ R V  L       ++ V H    D+I LL+ LL +DP +RL A  AL+HP+
Sbjct:  173 VSTRYYRAPEIMLTWQRYGKMVDIWSAGCILAEMLRGKPLFPGKDHIHQFFLITEVLGNPPPEVVQK--------------------ITSGNTQRVVNSLPNQEPRPLRAVFHEFDNDVISLLEQLLLFDPDKRLTAETALQHPY 297          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MK14B_DROME (Mitogen-activated protein kinase 14B OS=Drosophila melanogaster GN=p38b PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = -1
Query:  233 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 670
            V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L ++  VLG P    M   +   A  Y R                      L  +P    + +   A  L IDLL+ +L  D  +R+ A +AL HP+  +
Sbjct:  186 VATRWYRAPEIMLNWMHYNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIR---------------------SLPVMPRRNFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEK 313          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = -1
Query:  236 YVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP----NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 676
            YVV TR YRAPEVIL  + +    D+WSVGCI+ E+  G+ LF+ H++L+ L  + +V G        +                      S D+   V KL R       +++ +V+  A   I +L G+L  DP  R+ A EAL  PFF+
Sbjct:  183 YVV-TRWYRAPEVILSWMHYTQTVDIWSVGCIMAEMLLGKPLFKGHDHLDQLMEIMKVTGTPSKEFTAKLQ--------------------SEDARNYVTKLPRFRKKDLRILLPNVNPQA---IKVLDGMLLLDPESRITAAEALAFPFFS 310          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: HOG1_KLULA (Mitogen-activated protein kinase HOG1 OS=Kluyveromyces lactis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = -1
Query:  236 VSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 670
            VSTR+YRAPE++L    +N   D+WS GCI  E+  G+ LF   +++   +++  +LG  P  ++                    D   S ++++ V  L  R P        +   D IDLL+ +L +DP +R+ A +AL HP+ +
Sbjct:  176 VSTRYYRAPEIMLTWQKYNVEVDIWSAGCIFAEMIEGKPLFPGKDHVHQFSIITDLLGSPPKDVI--------------------DTICSENTLKFVTSLPHRDPVPFSSRFQNLEPDAIDLLEKMLVFDPKKRITAADALAHPYLS 302          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 48/171 (28.07%), Postives = 79/171 (46.20%), Query Frame = -1
Query:  236 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA-------RLDWPD------GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL----------IDLLQGLLRYDPAERLKAREALRHPFFT 679
            S  + +R+YRAPE+ILGL +    D+WS+GC++ EL  G  L+      + +  + +  G LP   ++ A  +  ++F R         RL  PD      G  S+++ + ++  L     +    D    D+          IDLL+ +L  D  +R+   E L HPF T
Sbjct:  359 STYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQG-LPAEYLLSAGTKTTRFFNRDTDSPYPLWRLKTPDDHEAETGIKSKEARKYIFNCLDDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTIDADKRITPIETLNHPFVT 528          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: DYRK4_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = -1
Query:  248 VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 670
            + +R YR+PEVILG  +N   D+WS+GCI+ EL +G  LF     +E LA +  VLG  P H    A RR   +  +G     P    +    +       L  ++++  D S    +D L+  L ++P+ R+   +AL+H
Sbjct:  380 IQSRFYRSPEVILGHPYNMAIDMWSLGCIMAELYTGYPLFPGENEVEQLACIMEVLGLPPAHFTQTASRRQVFFDSKGL----PKNINNNRGGKRYPDSKDL-TMVVKTYDSS---FLDFLRRCLVWEPSLRMTPEQALKH 512          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = -1
Query:  239 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLID-----LLQGLLRYDPAERLKAREALRHPFF 682
            +++ V T  YRAPE+++G   ++   D+WS+GCI  E+ + + LFQ    ++ L  + RVLG                       L+W +G  S    +A +   R   L  +  D   G  L+D     LL+GLL YDP+ RL A++AL HP+F
Sbjct:  178 YTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLG-------------------TPTELEW-NGVESLPDYKATFPKWRENFLRDKFYDKKTGKHLLDDTAFSLLEGLLIYDPSLRLNAKKALVHPYF 312          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: Y6481_DICDI (Probable serine/threonine-protein kinase DDB_G0286481 OS=Dictyostelium discoideum GN=DDB_G0286481 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 43/152 (28.29%), Postives = 77/152 (50.66%), Query Frame = -1
Query:  239 QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILIELC-SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 688
            ++++  V++RHY+ PE+++ +  ++Y  D+WS+GC+   L    +  F    N + L  + +VLG          D       + G  L     +  +   ++ W+      +  ++ D +  D ID L  LLRYDP ERL A+EA++HP+F
Sbjct:  459 KNYNVRVASRHYKPPELLVNMFDYDYSLDMWSLGCLFAGLILDRDPFFNGDNNNDQLLKIVKVLG---------TDDLFNFLDKFGLSLTDEQSSLIKPRQKSNWERF----IPYENDDIAQPDAIDFLDKLLRYDPTERLTAKEAMKHPYF 597          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 43/156 (27.56%), Postives = 72/156 (46.15%), Query Frame = -1
Query:  242 DHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 685
            +H Y   + TR YRA EV++G G+  P D+WS  C+  EL +G+ LF+ H+      + +HLA +  +LG +   +  +     E + + G  L   +           W L  +     +     A      L+ +L +D  +R  A +AL+HPF
Sbjct:  535 NHHYTDDIQTRQYRALEVLIGSGYGPPADIWSTACMAFELATGDYLFEPHQGDNYSRDEDHLAHISELLGQISPSIYKKGKHWREFFHKNGNLLHIHN--------LKPWSLYEVLRQKYEWSHEDAQQFESFLRPMLDFDQEKRATANDALKHPF 682          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: MK12_RAT (Mitogen-activated protein kinase 12 OS=Rattus norvegicus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = -1
Query:  239 YVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG-ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 676
            YVV TR YRAPEVIL  + +    D+WSVGCI+ E+ +G+ LF+ +++L+ L  + +V G  P   V +      K +  G   L+  D A+                     + +++   ++LL+ +L  D  +R+ A EAL HP+F
Sbjct:  185 YVV-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKILFKGNDHLDQLKEIMKVTGTPPPEFVQKLQSAEAKNYMEGLPELEKKDFASV--------------------LTNASPQAVNLLEKMLVLDAEQRVTAAEALAHPYF 311          
The following BLAST results are available for this feature:
BLAST of CX296631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
MPKC_ASPOR2.806e-1133.10Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MK14B_DROME2.806e-1131.54Mitogen-activated protein kinase 14B OS=Drosophila... [more]
MK12_DANRE2.806e-1133.55Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
HOG1_KLULA2.806e-1129.93Mitogen-activated protein kinase HOG1 OS=Kluyverom... [more]
HIPK2_HUMAN2.806e-1128.07Homeodomain-interacting protein kinase 2 OS=Homo s... [more]
DYRK4_MOUSE2.806e-1131.91Dual specificity tyrosine-phosphorylation-regulate... [more]
CDC2_CAEEL2.806e-1132.26Cell division control protein 2 homolog OS=Caenorh... [more]
Y6481_DICDI3.665e-1128.29Probable serine/threonine-protein kinase DDB_G0286... [more]
SPK1_CAEBR3.665e-1127.56Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
MK12_RAT3.665e-1131.76Mitogen-activated protein kinase 12 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionC05801A10SK FerrChloL1 Citrus clementina cDNA clone C05801A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296631 ID=CX296631; Name=CX296631; organism=Citrus clementina; type=EST; length=688bp
TTTTGGGGGATACCTTCAATTACCATTATAGTGCCGAAAGAAACGAAACA
AGACAGGTGGGTGCAGAAACATAAATTTTACTATACAAACAGCAATGTAT
AAAAAAGAGACAATAGAATATCATTCACCACGTGCATGGCTGTGTATTAT
TTCTTTTCTAAAATTGAACAAGCTCGTCAATAGCAAAGACGAGGCTTTGC
AATTACAAGGGAAAGCCACACCTTCTCACATCTCTCGTGAAGAAAGGATG
TCTTAGGGCTTCCCTGGCTTTGAGCCGCTCTGCTGGATCATATCGGAGGA
GCCCCTGAAGGAGATCAATCAAATCACCGGCAGAGTGATCTACATGCTGC
ATTATCAGGTTCGGGAGACGGAGAAGTTTCCAAACTGCCCTCATGCTATC
TCTCGAAGTTGCACCATCAGGCCAATCCAGTCGTGCACCTCTCCTAAAAT
ATTTCTCAGCACGGCGGTCAGCTCTTATCACCATATGGTGGGGGAGAGGC
CCTAAAACCCTCTCCATCATGGCAAGATGCTCTAAATTCTCGTGCGTTTG
AAAAAGAGCCTCGCCGGAGCAAAGTTCTATAAGAATGCAACCCACACTCC
ACAAATCACAAGGATAATTCCATCCAAGGCCTAAAATAACCTCTGGTGCA
CGATAATGTCGTGTTGATACAACATAGCTGTGATCCTG
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