CX296634

Overview
NameCX296634
Unique NameCX296634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            +E  +WES+  GSFTV   T      RGT+ITLHL++++ E+ +E RL+ +I K+S+ IS P+ +W                                                W ++NK   +WMR   EI+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+DL++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 NEAVLWESEGEGSFTVDTITKAS---RGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMW---------------------------QEGTPERDGPDGEKIPATEGYWKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            +E  +WES+  GSFTV   T      RGT+ITLHL++++ E+ +E RL+ +I K+S+ IS P+ +W                                                W ++NK   +WMR   EI+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+DL++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 NEAVLWESEGEGSFTVDTITKAS---RGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMW---------------------------QEGTPERDGPDGEKIPATEGYWKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            +E  +WES+  GSFTV   T      RGT+ITLHL++++ E+ +E RL+ +I K+S+ IS P+ +W                                                W ++NK   +WMR   EI+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+DL++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 NEAVLWESEGEGSFTVDTITKAS---RGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMW---------------------------QEGTPERDGPDGEKIPATEGYWKVMNKATALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_IDILO (Chaperone protein htpG OS=Idiomarina loihiensis GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 82/219 (37.44%), Postives = 118/219 (53.88%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            W SQ  G F +          RGT I LHLK+D  E+L+E RL+ +I K+SE +S P+ +W                                               EW  VN  + +W R+  +IT EEY  FYK++ +D++E L   H  VEG  E+  +L++PKRAP+DL++ R++ + +KLYV+RVFIMD+ E+L+P YL FV+G+VDS DLPL
Sbjct:  157 WRSQGEGDFEIADIDKAR---RGTDIILHLKDDADEFLDENRLRGIINKYSEHLSIPVQMWKEPVPESEDDEGNKVEGQPG---------------------------EWETVNSGQALWTREKSDITDEEYKEFYKTVAHDFDEPLLWSHNKVEGTTEYTNLLYIPKRAPWDLWN-REQQHGVKLYVKRVFIMDDAEQLMPTYLRFVRGLVDSNDLPL 344          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 81/219 (36.99%), Postives = 117/219 (53.42%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            WES   GS+T+  D   E   RGT ITLHLK++  EYL+E +++ +IKK+S+++ YP+ + +                                                  +N  K IW R   EI++EEY  FYK +++D+++     H+S EG  EFKA++++P   PFDLF  R     + LYV+RVFI DNCE L+P+YL F+KG+VDS DLPL
Sbjct:  153 WESTGDGSYTI-EDCEKET--RGTDITLHLKDEMKEYLDEWKIRSIIKKYSDYVQYPVVMDVTRDEPAKGVDGEVIEGGGTIEKTTE-----------------------ETLNSMKAIWTRAKSEISEEEYEEFYKHISHDYDKPFRTIHYSAEGTSEFKALIYIPSHKPFDLF-MRDHKKGVHLYVKRVFITDNCEALLPDYLRFMKGVVDSSDLPL 344          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 82/219 (37.44%), Postives = 120/219 (54.79%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            WES+  GSFTV   T     GRGT + LHL+ ++ E+L++ RL+ ++ K+S+ IS P+ ++                                               EW  VN+   +W R P+EI  EEY  FYK + +D+E+ L   H  VEG  E+ ++L+VP RAPFDL++ R + + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPL
Sbjct:  157 WESEGEGSFTVADVTKA---GRGTDVILHLRAEEDEFLDDWRLRSVVSKYSDHISVPVEMY------------------------KEGTPDSVGEGEEDGETIVGTPGEWEQVNRATALWTRNPKEIKDEEYQEFYKHVAHDFEDPLLWGHNRVEGAQEYTSLLYVPARAPFDLYN-RDQKHGLKLYVQRVFIMDDAEQFMPAYLRFVKGVLDSNDLPL 347          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.725e-35
Identity = 83/219 (37.90%), Postives = 123/219 (56.16%), Query Frame = 3
Query:   57 WESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            WES+  GSFTV  D + E  GRGT + LHL+ ++ E+L++ RL+ ++ K+S+ IS P+ ++                                               EW  VN+   +W R P+EI  EEY  FYK + +D+E+ L   H  VEG  E+ ++L+VP RAPFDL++ R++ + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPL
Sbjct:  157 WESEGEGSFTVA-DVTKE--GRGTDVILHLRAEEEEFLDDWRLRAVVAKYSDHISVPVEMF----------------------------KEGTPDREEDGETVVGTPGEWEQVNRATALWTRNPKEIKDEEYQEFYKHVAHDFEDPLLWGHNRVEGAQEYTSLLYVPARAPFDLYN-REQKHGLKLYVQRVFIMDDAEQFMPTYLRFVKGVLDSNDLPL 343          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35
Identity = 76/224 (33.93%), Postives = 125/224 (55.80%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            DE  +WES+  G+FTV   T      RGT+ITLHL++++ E+ ++ RL+ +I K+S+ IS P+ +W                                               +W ++NK   +WMR   +I+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+D+++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 DEAVLWESEGEGNFTVDTITKAS---RGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW---------------------------QEGTPESDGADGEKIPATEGQWKVMNKATALWMRSKADISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPAKAPWDMWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35
Identity = 76/224 (33.93%), Postives = 125/224 (55.80%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            DE  +WES+  G+FTV   T      RGT+ITLHL++++ E+ ++ RL+ +I K+S+ IS P+ +W                                               +W ++NK   +WMR   +I+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+D+++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 DEAVLWESEGEGNFTVDTITKAS---RGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW---------------------------QEGTPESDGADGEKIPATEGQWKVMNKATALWMRSKADISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPAKAPWDMWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
BLAST of CX296634 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35
Identity = 76/224 (33.93%), Postives = 125/224 (55.80%), Query Frame = 3
Query:   42 DEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPL 713
            DE  +WES+  G+FTV   T      RGT+ITLHL++++ E+ ++ RL+ +I K+S+ IS P+ +W                                               +W ++NK   +WMR   +I+ EEY  FYK +++D+ + L   H  VEG+ E+  +L++P +AP+D+++ R + + +KL+V+RVFIMD+ E+ +P YL FV+G++DS DLPL
Sbjct:  149 DEAVLWESEGEGNFTVDTITKAS---RGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW---------------------------QEGTPESDGADGEKIPATEGQWKVMNKATALWMRSKADISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPAKAPWDMWN-RDRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPL 341          
The following BLAST results are available for this feature:
BLAST of CX296634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
HTPG_SHESR7.744e-3635.27Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESM7.744e-3635.27Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESA7.744e-3635.27Chaperone protein htpG OS=Shewanella sp. (strain A... [more]
HTPG_IDILO7.744e-3637.44Chaperone protein htpG OS=Idiomarina loihiensis GN... [more]
HTPG_GEOUR7.744e-3636.99Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_AERHH1.011e-3537.44Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_AERS41.725e-3537.90Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_SHEB92.253e-3533.93Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB82.253e-3533.93Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB52.253e-3533.93Chaperone protein htpG OS=Shewanella baltica (stra... [more]

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Properties
Property NameValue
Genbank descriptionC05801B01SK FerrChloL1 Citrus clementina cDNA clone C05801B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296634 ID=CX296634; Name=CX296634; organism=Citrus clementina; type=EST; length=714bp
TTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCCAACGATGATGAGCAG
TACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACCAGGGACAC
TTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCACCTCAAGG
AAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAAG
AAGCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGAC
CACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAAAAGAAGGATG
AGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAAG
AAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACAA
GCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGAAGAGT
ATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCT
GTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTT
TGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCA
ATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAG
GAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGA
GGATCTCCCTCTTA
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