CX296636

Overview
NameCX296636
Unique NameCX296636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.073e-30
Identity = 69/154 (44.81%), Postives = 90/154 (58.44%), Query Frame = 2
Query:  122 NDNVQYFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISL---NPEDLLQPDIP--STWKAMEALYDSG 568
            N    YF L NG K+P IGLGTW++               GYRHID A+ YGNEKEIG  ++   E GV  R D+W+TSKLWC  H    VP A+++TLQDL ++Y+D YL+HWP     G   L      +L+  D+P   TW+AME L ++G
Sbjct:    9 NAREAYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR---ESGV-PRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQAMEELLETG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.206e-29
Identity = 67/146 (45.89%), Postives = 89/146 (60.96%), Query Frame = 2
Query:  137 YFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPE--DLLQPDIPSTWKAMEALYDSG 568
            +F L +G  MP +GLGTW+A               GYRH+D A  YG EKE+G  LK   E G I R+DL++TSK+WC + APE V  A++ TL+DLQ+DY+DLY +HWP R K G   + PE  ++L+ D+   WK ME L   G
Sbjct:   15 HFVLKSGHAMPAVGLGTWRAGSDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAG-IDRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDG-AHMPPEAGEVLEFDMEGVWKEMENLVKDG 158          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.576e-29
Identity = 66/157 (42.04%), Postives = 94/157 (59.87%), Query Frame = 2
Query:  131 VQYFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSG 568
            +QY+ LNNG K+P IG+G W+ ++             GYR  DCA  YGNEKE+G  + +  +DG++KR+DL+ITSKLW   HA E+V KA+ ++L D  +DY DLYL+H+P+  K          GF   + +  +  D+P   TW+AME L D G
Sbjct:    3 LQYYTLNNGRKIPAIGMGCWKLENAA--DMVYAAIKEGYRLFDCACDYGNEKEVGEGINRAIKDGLVKRKDLFITSKLWNNFHAKENVKKALMKSLSDFNLDYFDLYLMHFPISFKFVPFEEKYPPGFYCGDGDKFIYEDVPIIETWRAMENLVDEG 157          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.058e-29
Identity = 69/147 (46.94%), Postives = 90/147 (61.22%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSG 568
            L+ G KMP IGLGTW+++ G V          GYRHIDCA  YGNE EIG  LK+    G  + RE+L++TSKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TWKA+EAL   G
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVKYDSTHYKETWKALEALVAKG 154          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.058e-29
Identity = 69/147 (46.94%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSG 568
            L+ G KMP IGLGTW+++ G V          GYRHIDCA  YGNE EIG  LK+    G  + RE+L++TSKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  +  D      TWKA+EAL   G
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTICYDSTHYKETWKALEALVAKG 154          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 2.688e-29
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSG 568
            L+ G KMP IGLGTW+++ G V          GYRHIDCA  YGNE EIG  LK+    G  + RE+L++TSKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TWKA+E L   G
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKG 154          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.688e-29
Identity = 68/147 (46.26%), Postives = 90/147 (61.22%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSG 568
            L+ G KMP IGLGTW++  G V          GYRHIDCA  YGNE EIG  LK+    G ++ RE+L++TSKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TW+A+EAL   G
Sbjct:    8 LHTGQKMPLIGLGTWKSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDSPFPKNADGTIRYDSTHYKETWRALEALVAKG 154          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.510e-29
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSG 568
            L+ G KMP IGLGTW+++ G V          GYRHIDCA  YGNE EIG  L +    G  + RE+L++TSKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TWKA+EAL   G
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKG 154          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 3.510e-29
Identity = 69/147 (46.94%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSG 568
            L+ G KMP IGLGTW+++ G V          GYRHIDCA  YGNE EIG  LK+    G  + RE+L++TSKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  +  D      TWKA+EAL   G
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTICYDSTHYKETWKALEALVAKG 154          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_ENCCU (Aldose reductase OS=Encephalitozoon cuniculi GN=ECU01_0970 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.820e-29
Identity = 71/149 (47.65%), Postives = 92/149 (61.74%), Query Frame = 2
Query:  143 ELNNGAKMPPIGLGTWQAQ-HGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDH-APEDVPKAMDRTLQDLQIDYVDLYLVHWPVR---TKKGFISL--NPEDLLQPDIPSTWKAMEALYDSG 568
            +LNNG ++P +GLGTW  +   V+          GYRHID A+ YGNEK IG  LKKLF++GV++R+DL+ITSKLW   H  PED    + R+L DLQ+DYVDLYL+HWPV       G +       ++ + D    WK MEAL D G
Sbjct:    7 KLNNGKEIPTVGLGTWGMEDEAVLEGAIRNALSLGYRHIDTAFIYGNEKMIGNILKKLFDEGVVQRKDLFITSKLWNTFHGCPED---GLRRSLNDLQMDYVDLYLIHWPVTFDPAPDGTVESCGKKYNVGKFDAVGVWKKMEALVDLG 152          
The following BLAST results are available for this feature:
BLAST of CX296636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
YBN4_SCHPO7.073e-3044.81Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
ALDR_HORVU1.206e-2945.89Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
XYL1_PACTA1.576e-2942.04NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
AK1A1_RAT2.058e-2946.94Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_PONAB2.058e-2946.94Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
AK1A1_MOUSE2.688e-2946.26Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
AK1A1_BOVIN2.688e-2946.26Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_PIG3.510e-2946.26Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_HUMAN3.510e-2946.94Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
ALDR_ENCCU7.820e-2947.65Aldose reductase OS=Encephalitozoon cuniculi GN=EC... [more]

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Properties
Property NameValue
Genbank descriptionC05801B03SK FerrChloL1 Citrus clementina cDNA clone C05801B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296636 ID=CX296636; Name=CX296636; organism=Citrus clementina; type=EST; length=568bp
GAGGAATTTCTGCCATCTCCCCGCAAATTCAATCTCATCTCTCCACAAAT
TAAAAGGCCAGTGATCACTCACTGCCCCTGGTCATTTCACACACATAACT
CGGGAAATGGACCAAATAGCAAACGATAACGTTCAATACTTCGAGTTGAA
CAATGGAGCCAAAATGCCGCCTATCGGATTAGGCACATGGCAGGCTCAAC
ATGGTGTTGTTGCCGAAGCCATTGCTATTGCCATCAAGGCTGGATACCGT
CATATCGATTGTGCTTATTTCTATGGCAATGAAAAGGAGATTGGTACCGA
GCTGAAGAAACTGTTTGAAGATGGAGTGATCAAGCGTGAGGATCTATGGA
TCACCTCCAAGCTCTGGTGTTGTGATCATGCACCAGAAGATGTACCAAAG
GCAATGGACAGAACTTTGCAGGACTTGCAGATTGATTACGTGGATTTGTA
CCTCGTGCACTGGCCAGTGCGAACGAAGAAGGGATTTATAAGCCTCAATC
CCGAAGACCTTCTTCAACCAGATATACCAAGCACATGGAAAGCAATGGAG
GCACTTTATGATTCTGGC
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