CX296667

Overview
NameCX296667
Unique NameCX296667
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_CANAL (Eukaryotic translation initiation factor 3 subunit G OS=Candida albicans GN=TIF35 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.538e-20
Identity = 59/151 (39.07%), Postives = 83/151 (54.97%), Query Frame = 1
Query:   70 CRTCGKKGDHWTSRCPFKDL--AAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLL--ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWA 510
            CR CG  GDH+T++CPFKD   AA   T                   G YVP  +RA A         R+D  +++V+ L+    E D+L  ELF  FG + RV +  +++TG SRGF +V+F  +E AQRA++  NG GY +LIL +EW+
Sbjct:  127 CRVCG--GDHYTAKCPFKDTLGAAAGVTPSGTTPEPTSEGGAGAAGAGKYVPRHLRADANGNVPTREARDDSTTLKVSQLNSFVDE-DMLRNELFAKFGPLQRVTIVRNRETGESRGFAYVSFATEEIAQRALDTFNGKGYHSLILHLEWS 274          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_KLULA (Eukaryotic translation initiation factor 3 subunit G OS=Kluyveromyces lactis GN=TIF35 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.539e-20
Identity = 59/172 (34.30%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   28 AKAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETF---IDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGT----DMRRRNDENSVRVTNLSEDTREPDLL-ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 519
            AK +       ++ CR CG  G H+T  CP+KD      T    +D                G YVPP +RAGA    +    D R R+D  ++R+T ++E   E  L  EL  PFG + RV+V  + +TG SRG  +V F  +E A +A+  L G G+ N +L  EW+ P+
Sbjct:   95 AKEKAANSTQKVITCRICG--GAHFTMHCPYKDTLGKKPTTSAGLDPAIGGGDMSAQGGSGSGRYVPPSLRAGARDPSSNAYQDQRERDDAKTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTFQTEEIAAQALKLLEGRGFMNFMLHAEWSKPK 264          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_PICGU (Eukaryotic translation initiation factor 3 subunit G OS=Pichia guilliermondii GN=TIF35 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.115e-19
Identity = 62/158 (39.24%), Postives = 87/158 (55.06%), Query Frame = 1
Query:   70 CRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXT--KGTYVPPGMRAGAERTGTDM--RRRNDENSVRVTNLS----EDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 519
            CRTCG  G+H+TS+CPFKD      T I               T   G YVPP +R GA     DM  R R+D  +++++ L+    ED    +LL+ F P   + RV +  +++TG SRGF +V+FV +  A+ A+N LNG GY +LIL +EW   R
Sbjct:  126 CRTCG--GNHFTSKCPFKD------TLISDSANTSAAATPEPDTDASGKYVPPSLRKGAGAV-RDMSGRDRDDSTTLKISQLNTFVDEDMLRNELLKRFHP---LQRVTIVRNRETGESRGFAYVSFVTERQAEEALNTLNGKGYHSLILHLEWPKKR 271          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_VANPO (Eukaryotic translation initiation factor 3 subunit G OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF35 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.456e-19
Identity = 65/181 (35.91%), Postives = 95/181 (52.49%), Query Frame = 1
Query:   31 KAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLA----------APAET---FIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLE-LFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 519
            KA++   G  ++ CR CG    H+T  CPFK +           AP E     ++ P              G YVPP  RAGA+   +D     R R+D  ++++T L+E+  E  L E L  PFG + RV V  +++TG SRG  FV F ++E A++A   LNG G+ NLIL+V+W+ P+
Sbjct:   97 KAKIKSDG--IISCRLCGNA--HYTMNCPFKSIMSDIAALEDPNAPIEVGSNAVEAPVETASSAAAV--ASGKYVPPSRRAGAKDPSSDAYRDSRERDDMATLKITQLNENADETTLREELLFPFGNIPRVVVVRNRETGRSRGLAFVTFSSEEVAEKARRLLNGRGFMNLILQVDWSKPK 271          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_YEAST (Eukaryotic translation initiation factor 3 subunit G OS=Saccharomyces cerevisiae GN=TIF35 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19
Identity = 66/179 (36.87%), Postives = 90/179 (50.28%), Query Frame = 1
Query:   31 KAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-----------GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLE-LFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 519
            KA L K G   + CR CG   DH T  CPFK + +      D P             K           G YVPP  RAGA    +D     R R+D  ++++  ++E+  E  L E L  PF  + RV V  +++TG SRG  FV F ++E A++A+  L+G GY NLILRVEW+ P+
Sbjct:   99 KASLTKTG---LQCRLCGN--DHMTMNCPFKTILSELSALED-PATNEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGARDPSSDAYRDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGRGYMNLILRVEWSKPK 271          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_YEAS7 (Eukaryotic translation initiation factor 3 subunit G OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF35 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19
Identity = 66/179 (36.87%), Postives = 90/179 (50.28%), Query Frame = 1
Query:   31 KAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-----------GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLLE-LFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 519
            KA L K G   + CR CG   DH T  CPFK + +      D P             K           G YVPP  RAGA    +D     R R+D  ++++  ++E+  E  L E L  PF  + RV V  +++TG SRG  FV F ++E A++A+  L+G GY NLILRVEW+ P+
Sbjct:   99 KASLTKTG---LQCRLCGN--DHMTMNCPFKTILSELSALED-PATSEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGARDPSSDAYRDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGRGYMNLILRVEWSKPK 271          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_CAEEL (Eukaryotic translation initiation factor 3 subunit G OS=Caenorhabditis elegans GN=eif-3.G PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.245e-19
Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query:   70 CRTCGKKGDHWTSRCPFKDL-AAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 516
            CR C K  DHW++ CP+K +     E   DK             T+   +  GMR    +     R R+DEN+ RVTNL ++  E +L +LF   G V R+++A D+ TG+ +GF FV F +++DA RAI +LN     +++L+VEW  P
Sbjct:  121 CRHC-KGNDHWSTHCPYKVMYQLDEEADADKD------------TEKDRMAMGMRPDGRQID---RNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKVEWTRP 254          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_CANGA (Eukaryotic translation initiation factor 3 subunit G OS=Candida glabrata GN=TIF35 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.535e-19
Identity = 58/167 (34.73%), Postives = 87/167 (52.10%), Query Frame = 1
Query:   64 MVCRTCGKKGDHWTSRCPFKDLAAPAETFIDK---------PXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTREPDLL-ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 519
            + CR CG    H+T  CPFK + +      D          P            T  G YVPP  RAGA    +D     R R+D  ++++  L+E+  E  L  EL  PF  + +V V  +++TG SRG  FV F+N++ A++A++ L+G G+ NLILRV+W+ P+
Sbjct:  105 ITCRLCGNA--HYTMNCPFKTILSEISALEDPAAAAAGPGLPEEVPAGKADSGITATGAYVPPSRRAGARDPSSDAYRDARERDDSCTLKILQLNENADENTLRNELLFPFEPIQKVVVVRNKETGRSRGLAFVTFINEDMAEKALHFLDGRGFMNLILRVDWSKPK 269          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_DEBHA (Eukaryotic translation initiation factor 3 subunit G OS=Debaryomyces hansenii GN=TIF35 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18
Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = 1
Query:   70 CRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMR--AGAERTGTDMRRRNDENSVRVTNLSEDTREPDLL--ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 519
            CRTCG  GDH+TS+CPFKD      T                   G YVP  +R  A       D++ R+D  +++++ L+    E D+L  EL   +G   R  V  +++TG SRGF +V F  +  A+ A+N LNG GY +LIL +EW+  R
Sbjct:  126 CRTCG--GDHFTSKCPFKDTLISDSTDASNAATPEPADDGMN-APGKYVPRHLRKDANGNMPAKDLKDRDDSTTLKISQLNSIVDE-DMLRNELLGRYGPFQRAIVVRNRETGESRGFAYVTFATESKAEEALNDLNGKGYHSLILHLEWSKKR 275          
BLAST of CX296667 vs. ExPASy Swiss-Prot
Match: EIF3G_CAEBR (Probable eukaryotic translation initiation factor 3 subunit G OS=Caenorhabditis briggsae GN=eif-3.G.1 PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.325e-17
Identity = 54/155 (34.84%), Postives = 78/155 (50.32%), Query Frame = 1
Query:   70 CRTCGKKGDHWTSRCPFK-----DLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRR-RNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATP 516
            CR C K  DHW++ CP+K     D  A A    D                          G    G  M R R+DEN+ RVTNL ++  E +L ++F   G V R+++A D+ TG+ +GF FV F +++DA RAI +LN     +++L+VEW  P
Sbjct:  127 CRHC-KGNDHWSTHCPYKVMYQLDEEADANQDADSKNAL---------------------GLRGDGRQMERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKVEWTRP 259          
The following BLAST results are available for this feature:
BLAST of CX296667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EIF3G_CANAL6.538e-2039.07Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_KLULA8.539e-2034.30Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_PICGU1.115e-1939.24Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_VANPO1.456e-1935.91Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_YEAST1.902e-1936.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_YEAS71.902e-1936.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CAEEL3.245e-1936.67Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CANGA5.535e-1934.73Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_DEBHA2.103e-1836.36Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CAEBR2.325e-1734.84Probable eukaryotic translation initiation factor ... [more]

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Properties
Property NameValue
Genbank descriptionC05801D12SK FerrChloL1 Citrus clementina cDNA clone C05801D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296667 ID=CX296667; Name=CX296667; organism=Citrus clementina; type=EST; length=749bp
GATTCGGCCCAGGCCGTGCCGAATTCGGCCAAGGCGCAACTTGGGAAAGG
TGGTGCTGTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCACT
GGACGTCAAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACATTC
ATTGATAAACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCGAC
CAAGGGAACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAACTG
GAACTGATATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCAAC
CTATCGGAGGACACTCGGGAACCTGACTTGCTTGAGCTCTTCCGGCCTTT
TGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAGAAGACTGGCATAA
GCAGAGGTTTTGGTTTTGTGAACTTTGTGAACAAGGAAGATGCTCAGAGA
GCTATCAACAAACTGAATGGCTATGGTTATGACAATCTCATCCTCAGAGT
TGAATGGGCCACTCCAAGGACTAACTAGATCGATCTATTTATCCTTGAGC
TTTAACGGGATACAATATCAATTTTGTGTATTATTTTATACTATCTTAAG
TATTGAATGATCTTGGAGTGTTTTGTTGAGAGACTATGGCTTTCCTACAA
GTACTTTGTACTCGAGATGATTTAATTTATGCCGTANGTTCAATGTTTTT
CAATGTTATTTGATTTCTAATAAGATACCAGGCACACTTATGTTTCCTT
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