CX296670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.339e-19 Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 67.3958 bits (163), Expect = 2.562e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.339e-19 Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 67.3958 bits (163), Expect = 2.562e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.361e-19 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 67.3958 bits (163), Expect = 2.562e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.361e-19 Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 68.5514 bits (166), Expect = 1.150e-11 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 67.3958 bits (163), Expect = 2.562e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 68.5514 bits (166), Expect = 1.150e-11 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 67.3958 bits (163), Expect = 2.562e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 66.6254 bits (161), Expect = 4.371e-11 Identity = 31/33 (93.94%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 67.3958 bits (163), Expect = 2.562e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CX296670 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 Query: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 243 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGK Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 2 Score: 67.3958 bits (163), Expect = 2.562e-11 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 1 Query: 1 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99 IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 The following BLAST results are available for this feature:
BLAST of CX296670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296670 ID=CX296670; Name=CX296670; organism=Citrus clementina; type=EST; length=244bpback to top |