CX296694

Overview
NameCX296694
Unique NameCX296694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.908e-36
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+ NKITITNDKGRLSK+EIE+MVQEAE+YKAEDE  + +V AKN LE+YA+NM++ V+DE +  KL  ADKKK+ D   + I WLDSN LA+ +EF  K +ELE +C+PII+ +YQ
Sbjct:  495 TGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQ 612          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.137e-35
Identity = 69/118 (58.47%), Postives = 90/118 (76.27%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N+ITITNDKGRLSKDEIE+MV +A KY+A+D   + +VEAKN LENYAY+M+N + D  +  KLD +DK  +   ID  ++WL SNQ A  +E+E K KELES+CNPI+ KMYQ
Sbjct:  497 TGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQ 614          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.939e-35
Identity = 69/118 (58.47%), Postives = 92/118 (77.97%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+  KITITNDKGRLSK+EI++MV EAEKYKAEDE    +++AKN LE+YAY++RN + D  +  K+D +DK+ ++ A+ + I+WLDSN  A  DEFE K KELES+ NPI+AK+YQ
Sbjct:  493 TGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.939e-35
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+ NKI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY++RN + D K+  KLD +DK+K++  ID+ + WLD NQ A  +EFE + KELES+ NPI+ K Y
Sbjct:  494 TGKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.533e-35
Identity = 68/118 (57.63%), Postives = 91/118 (77.12%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG+  KITITNDKGRLSK+EI++MV EAEKYKAEDE    +++AKN LE+YAY++RN + D  +  K+D +DK+ I+ A+ + I+WLD N  A  DE+EDK KELE + NPI+AK+YQ
Sbjct:  493 TGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.308e-35
Identity = 68/118 (57.63%), Postives = 90/118 (76.27%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            TG++N+ITITNDKGRLSKDEIE+MV +A KY+A+D+    +VEAKN LENYAY+M+N + D  +  KLD  DK  +   I+ A++WL SNQ A  +E+E K KELE++CNPI+ KMYQ
Sbjct:  498 TGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQ 615          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.643e-35
Identity = 68/117 (58.12%), Postives = 91/117 (77.78%), Query Frame = -2
Query:  303 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 653
            TG+ N+ITITNDKGRLSK+EIE+M+ EAEK+K EDE   K+V AKN LE+YAY++RN + D K+  KLD ADK+K++  ID+ + WLD NQ A  +E+E++ KELE+I NPI+ K Y
Sbjct:  494 TGKTNQITITNDKGRLSKEEIERMLAEAEKFKEEDEAEAKRVAAKNGLESYAYSLRNTLSDSKVDEKLDAADKEKLKSEIDKIVAWLDENQQATREEYEERQKELEAIANPIMMKFY 610          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.370e-35
Identity = 67/116 (57.76%), Postives = 88/116 (75.86%), Query Frame = -2
Query:  303 GQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 650
            G+ NKI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY++RN + D K+  KLD +DK+K++  ID+ + WLD NQ A  +EFE + KELES+ NPI+ K Y
Sbjct:  493 GKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY 608          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.626e-35
Identity = 65/118 (55.08%), Postives = 94/118 (79.66%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            +G++NKITITNDKGRLSK++IEKMVQEAEKYKA+D+  +++V+AKN LE+YA+N+++ V+DE +  K+   DK+ I +   Q I WL++NQLAE +E+  + K+LE +C PII K+YQ
Sbjct:  496 SGKQNKITITNDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISEKCTQVISWLENNQLAEKEEYAFQQKDLEKVCQPIITKLYQ 613          
BLAST of CX296694 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.626e-35
Identity = 66/118 (55.93%), Postives = 94/118 (79.66%), Query Frame = -2
Query:  300 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNPLENYAYNMRNPVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 653
            +G++NKITITNDKGRLSK+EIE+MVQEAE+YKA+DE  ++KV AKN LE+ A+NM++ V+ + +  K+   D+KKI D  +Q I W+++NQ+AE +E+E + KELE +CN II K+YQ
Sbjct:  497 SGKQNKITITNDKGRLSKEEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ 614          
The following BLAST results are available for this feature:
BLAST of CX296694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
HS71A_MOUSE3.908e-3661.02Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP70_LEIDO1.137e-3558.47Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP72_SCHPO1.939e-3558.47Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP72_PARBA1.939e-3558.12Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP71_SCHPO2.533e-3557.63Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_LEIAM3.308e-3557.63Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_NEUCR5.643e-3558.12Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP71_PARBA7.370e-3557.76Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP70_XENLA9.626e-3555.08Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_PLEWA9.626e-3555.93Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05801G06SK FerrChloL1 Citrus clementina cDNA clone C05801G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296694 ID=CX296694; Name=CX296694; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTTTTTTAGGGACCGAAAAATATTCATTATATAAATT
GGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTA
ATATTCCTCCTAAGGCTAAAACAACATAAGATAAAAACCAAACGTCCAGT
TTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAACAAAATAAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGGGGCACTGCCACCAG
CTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAAATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGGGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGGATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCGT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTATCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
CGTT
back to top