CX296750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_METFK (Chaperone protein hscA homolog OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=hscA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 57/175 (32.57%), Postives = 90/175 (51.43%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 I + KR +GR D + + LP+ Q VD+ P + + A + P E+ A L L+A AE L + V+T+P F Q + A +AG++VLRL+ EPTA A+ Y L + SE I V++++G G DV++ GV ++ + +G SA+GG+D Sbjct: 83 IASAKRFLGRGLND--IGDTSHLPY--QFVDV---PGMVQIETRAGIKS-PVEISAEILKSLKARAEQALGGELTGAVITVPAYFDDAQRQATKDAARIAGINVLRLLNEPTAAAIAY----------GLDNASEGIYVVYDLGGGTFDVSILRLTKGVFEVLSTNGDSALGGDD 239
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_LARHH (Chaperone protein hscA homolog OS=Laribacter hongkongensis (strain HLHK9) GN=hscA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 58/175 (33.14%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 + ++KR +GR +D A+ F VD P + LV + P EV A L L+A AE+ L + V+T+P F Q + A +AGL+VLRL+ EPTA A+ Y L + +E V++++G G DV++ GV ++ A SG SA+GG+D Sbjct: 83 VVSVKRFMGRGLSDLADAAATPYRF----VDA---PGMVRLVTRQGEKS-PVEVSADILRALKARAESSLGGELTGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAIAY----------GLDNAAEGTYVVYDLGGGTFDVSILRLTRGVFEVLATSGDSALGGDD 239
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_AZOSE (Chaperone protein hscA homolog OS=Azoarcus sp. (strain EbN1) GN=hscA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 TP E+ A L L A AE L P+ V+T+P F Q + A +AGL+VLRL+ EPTA A+ Y L + SE + I+++G G D+++ + G+ ++ A +G +A+GG+D Sbjct: 124 TPVEISAEILKTLGARAEASLGGPLTGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAY----------GLDNASEGVYAIYDLGGGTFDLSILKLSRGIFEVLATNGDAALGGDD 239
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_PROA2 (Chaperone protein dnaK OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581 +F++KR +GR D V + K P+ V ++ R I ++ +P+E+ A+ L +++ AE L + V+T+P F+ Q + A +AGL V R++ EPTA AL Y +EK+AV F++G G D+++ GV ++K+ G +GG+D Q + Sbjct: 66 VFSIKRFMGR-KFDEVPNEKKIAPYKVVNINGEARVEIDD------KNYSPQEISAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAAALAYGLDKKKE--------NEKVAV-FDLGGGTFDISILELGDGVFEVKSTDGDTHLGGDDFDQTI 229
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_CARHZ (Chaperone protein dnaK OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 TP+E+ A+ L +L+ AE L I V+T+P F+ Q + A +AGL VLR++ EPTA AL Y L E+ +++++G G DV++ GV ++KA +G + +GG+D Q + Sbjct: 87 TPQEISAMILQKLKQDAEAYLGEKIEKAVITVPAYFTDAQRQATKDAGRIAGLEVLRIINEPTAAALAY----------GLDKEGEQTILVYDLGGGTFDVSILEIGDGVFEVKATAGNNRLGGDDFDQRI 207
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_CALS8 (Chaperone protein dnaK OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 46/131 (35.11%), Postives = 73/131 (55.73%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 +PEE+ A+ L++L+A AE L I V+T+P F+ Q + A +AGL VLR++ EPTA AL Y G +KI +++++G G DV++ GV ++ A SG + +GG+D Q + Sbjct: 87 SPEEISAMILMKLKADAEAYLGEKITQAVITVPAYFTDSQRQATKNAGRIAGLEVLRIINEPTAAALAYGLDK---------EGHQKI-MVYDLGGGTFDVSILEIGEGVIEVLATSGNNRLGGDDFDQRI 207
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_BACV8 (Chaperone protein dnaK OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 56/178 (31.46%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQ 575 IF++KR +G D V + +P+ V D V+ R TP+E+ A+ L +++ AE L + + V+T+P FS Q + A +AGL V R++ EPTA AL Y H+++ KIAV F++G G D+++ GGV ++ + +G +GG+D Q Sbjct: 66 IFSIKRFMGET-WDQVQKETARVPYKVVKGDNNT-----PRVDIDGRLYTPQEISAMILQKMKKTAEDYLGQEVTEAVITVPAYFSDSQRQATKEAGQIAGLEVKRIVNEPTAAALAYG---LDKAHKDM-----KIAV-FDLGGGTFDISILEFGGGVFEVLSTNGDTHLGGDDFDQ 228
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 54/178 (30.34%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 57 KRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQL-KRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALS-GSAIGGEDLLQNM 581 KRLIGR +D V A K PF V ++ G RP I ++ EE+ ++ L++++ AE L K + + V+T+P F+ Q + ++G+++LR++ EPTA A+ Y + G+E+ +IF++ G DV+V G+ ++K+ S + +GGED M Sbjct: 70 KRLIGRNFSDTNVKADMKHWPFTV--IEEGGRPKIKIEFKGESKTFYAEEISSMVLLKMKETAEAYLGKESVTDAVVTVPAYFNDSQRQATKECGVISGMNILRIINEPTAAAIAYGL--------DKKGGAERNVLIFDLVGGTFDVSVLTIEEGIFEVKSTSRDTHLGGEDFDNRM 237
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP13_RAT (Heat shock 70 kDa protein 13 OS=Rattus norvegicus GN=Hspa13 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 53/181 (29.28%), Postives = 92/181 (50.83%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKS-LPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 I++ KR IG++ T + A PF V + G+ F ++ +N +PE V + L++L+ MAE L P+ N V+++P F Q +A +AGL +LR++ EPTA A+ Y + ++ ++G G DV++ GG+ +A+SG + +GG+D Q + Sbjct: 96 IYDAKRFIGKIFTPEELEAEIGRYPFKVLHKN-GMAEF--SVTSNETIIVSPEYVGSRLLLKLKEMAEKYLGMPVANAVISVPAEFDLQQRNSTIQAANLAGLKILRVINEPTAAAMAYGLHKVDVFY----------VLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRL 263
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_PSEU5 (Chaperone protein hscA homolog OS=Pseudomonas stutzeri (strain A1501) GN=hscA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 I ++KRL+GR D V + LP+ + + + PFI + + +P E+ A L LR AE L + V+T+P F Q + A +AGL+VLRL+ EPTA A+ Y L +E + I+++G G D+++ GV ++ A G +A+GG+D Sbjct: 82 ISSVKRLMGRGLAD-VKQLGEQLPYRFRQAESQM-PFIETVQG----AKSPVEISAEILRALRERAEAALGGELVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAY----------GLDRQAEGVVAIYDLGGGTFDISILRLTKGVFEVLATGGDTALGGDD 240 The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bpback to top |