CX296763
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11 Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = -2 Query: 334 QNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDI 690 Q + Y EP+ Q + + + + RPFGVSLLIAG DE+ P L+ +DPSG ++ A A+ L+++YN+DL L++A A+ LK+ E ++T N+++ Sbjct: 95 QQYFLVYQEPIPTGQLVQRVASVMQEY---TQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEENIEV 210
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = -2 Query: 325 IDEHIGCAMSD*LL---MLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 768 ID+HI A S + +LV + E Q +R +YGEP+ + + +CDL + RPFG +LL+AG ++ P LY TDPSG +++ A AI ++ Y+ DL ++ A +A+ L + +EE +P ++++A + Sbjct: 72 IDDHIAAAPSGIIADARVLVD--RARLEAQVYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 51/177 (28.81%), Postives = 87/177 (49.15%), Query Frame = -2 Query: 280 IDEHIGCAMS----D*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSIL----KQVMEEK-----VTPNNVDIARVAPTYHLYTPSEVEAV 768 ID+HIG A + D +++ + + T HR YGEP VE + + D+ + + RPFGV+L+ AG + +G + +Y TDP G ++ A AI ++ Y D++L+EA +AL IL ++ +E+K P+ V++A + ++T E V Sbjct: 74 IDDHIGVAFAGMGGDGRILIDYA---RVFTVRHRLLYGEPPPVELVAKVVADVKQAY---TQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYITVKERMFTKMTKEQV 244
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 44/146 (30.14%), Postives = 75/146 (51.37%), Query Frame = -2 Query: 268 ETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSI--LKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 696 E Q+H+ + +P+TVE T+ + L ++ + + RPFG+S LI G D++G P LY TDPSGT+ A AI L++ Y +D + E I L+I L +V++ + I R +++ E+E ++ + Sbjct: 92 ECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGR---RPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQSGGKNIELAIIRRDQPLKMFSAKEIELEVSEI 234
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11 Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = -2 Query: 268 ETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSI--LKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 696 E Q+H+ + +P+TVE T+ + L ++ + + RPFG+S LI G D++G S LY TDPSGT+ A AI L++ Y +D ++E I L+I L +V++ + I R +++ EVE + + Sbjct: 98 ECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGR---RPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIELAIIRRNQPLKMFSAKEVELYVTEI 240
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11 Identity = 52/173 (30.06%), Postives = 82/173 (47.40%), Query Frame = -2 Query: 268 IDEHIGCAMSD*L---LMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVINRL 768 ID HIG A S + LV + E+Q +R SY E + VE ++ LCD + + +RP+G +LLIAG + L+ TDPSGT + A I +E+YN + ++++A + L L E K N V+I V P + + EV + + ++ Sbjct: 71 IDNHIGVASSGLVGDARSLVD--RARVESQVNRVSYDEQIDVEMLSKKLCDHMQTY---TQFGGARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQI 238
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11 Identity = 50/173 (28.90%), Postives = 81/173 (46.82%), Query Frame = -2 Query: 268 IDEHIGCAMSD*LL---MLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 768 ID+HIG A S + LV + E Q +R SY E + VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG + A AI + Y +D+ + A + + L + E K +++ V+ + P EVE ++++ Sbjct: 71 IDDHIGAATSGLVADARSLVD--RARVEAQVNRVSYDELIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQI 238
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11 Identity = 53/176 (30.11%), Postives = 85/176 (48.30%), Query Frame = -2 Query: 277 IDEHIGCAM----SD*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAI-XXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVME-EKVTPNNVDIARVAP-----TYHLYTPSEVEAVI 768 IDEH+ CA+ SD +++ + + +Q + Y EPM VE +CD + + RPFGVS L AG D + G LY +DPSG F A +I L+ Y D++L+EA +AL +L + M+ + ++ + YH++T +E++A I Sbjct: 69 IDEHVVCAVAGITSDANILINYA---RLSSQRFFYQYQEPMPVEQLVSQICDTKQGY---TQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLALKVLTKTMDRSNINSEKLEFSYFTKQGDNVVYHIFTAAELDAFI 238
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11 Identity = 49/172 (28.49%), Postives = 85/172 (49.42%), Query Frame = -2 Query: 268 IDEHIGCAMSD*LL-MLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSL-LIAGSDENGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 768 I + IGCAM+ + + E N R+ YG M V+ + + D+ + + E RP G S+ LIA +E GPS+Y TDP+G F A ++ L+++Y +L+ ++A +A+S L V+ PN ++I V+ PT+ + E+E + ++ Sbjct: 72 ITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAE---MRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKI 240
BLAST of CX296763 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11 Identity = 41/152 (26.97%), Postives = 76/152 (50.00%), Query Frame = -2 Query: 334 IDEHIGCAM----SD*LLMLVHC*TCKGETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIXXXXXXXXXSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 768 +D+H+GC+ SD +++ + + + HR Y EP+ ++ T+ + D+ + + RPFGV+L+I G D P L T+PSG F A AI ++ Y +DL +Q+ + + L ++ EK+ P+N+++ Sbjct: 72 LDDHVGCSFAGLASDGRILIDYA---RSQALQHRLIYDEPINIDYLTKLVSDVKQMY---TQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALASTLKPGEKLAPSNIEV 217 The following BLAST results are available for this feature:
BLAST of CX296763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296763 ID=CX296763; Name=CX296763; organism=Citrus clementina; type=EST; length=769bpback to top |