CX296777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_CYAP7 (50S ribosomal protein L17 OS=Cyanothece sp. (strain PCC 7424) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 67 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 390 +L RP R ++LR + ++L++H +I TT+ +AK VR AD M+ L K+GSL A R+A ++ ++H+LF + RY +R GGYTR++R+ R GD A MA IE V Sbjct: 9 QLGRPADQRKALLRALTTELIRHGQITTTLTRAKAVRSQADKMITLAKDGSLAARRQAMGYIYDKQLVHRLFDQAQERYSNRNGGYTRVVRTLRRRGDNAEMAIIELV 116
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_CLOB8 (50S ribosomal protein L17 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20 Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 52 MTKFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 390 M RKL PT R +MLR +V+ L+KH +IETT +AKE R +A+ M+ LGK G L A R+ ++V+ + V+ LF +A +Y +R GGYTR+++ R GD A + +E V Sbjct: 1 MAGHRKLGLPTDQRRAMLRNLVTSLLKHGKIETTETRAKETRSIAEKMITLGKRGDLHARRQVLSYVQEELVVKNLFDNVAPKYTERNGGYTRIIKKGPRRGDGAEIVILELV 113
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_BLOPB (50S ribosomal protein L17 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20 Identity = 48/111 (43.24%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 67 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 KLNR + HR +M + MV LV H+ I+TT++KAK +RR+ + ++ K ++ R + R +DV+ KLFT+++ + +R GGYTR+L+ +R GD APMAYIE V+R+ Sbjct: 9 KLNRTSAHRKAMFKNMVVSLVMHKIIKTTLSKAKALRRIIEPLITRSKVDTIANRRLIFSKTRNNDVVTKLFTQISPYFYNRPGGYTRILKCGLRKGDNAPMAYIELVERS 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ANAVT (50S ribosomal protein L17 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 58 KFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 390 + +KL +P R ++LR + ++L++H RI TT+ +AK VR D ++ L K+GSL A RRA ++ ++H LF +++ RY +R GGYTR+L + R GD A MA IE V Sbjct: 6 RVKKLGKPADQRRALLRALTTELIRHGRITTTLVRAKVVRSEVDKIITLAKDGSLAARRRALGYIYDKQLVHALFEQVSSRYGNRQGGYTRILHTVPRRGDNAEMAIIELV 116
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ANASP (50S ribosomal protein L17 OS=Anabaena sp. (strain PCC 7120) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 58 KFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 390 + +KL +P R ++LR + ++L++H RI TT+ +AK VR D ++ L K+GSL A RRA ++ ++H LF +++ RY +R GGYTR+L + R GD A MA IE V Sbjct: 6 RVKKLGKPADQRRALLRALTTELIRHGRITTTLVRAKVVRSEVDKIITLAKDGSLAARRRALGYIYDKQLVHALFEQVSSRYGNRQGGYTRILHTVPRRGDNAEMAIIELV 116
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ACAM1 (50S ribosomal protein L17 OS=Acaryochloris marina (strain MBIC 11017) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20 Identity = 47/109 (43.12%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 58 KFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIE 384 + KL +P R ++LR++ +QL++H R+ TT A+AK VR + M+ L K+GSL + R+A ++ ++H LF ++A RY DR GGYTR++R+ R GD A MA IE Sbjct: 6 RVHKLGKPADQRKALLRSLSTQLIRHGRVTTTKARAKAVRSQVEKMITLAKDGSLASRRQALGYIYDKQLVHALFDQVADRYGDRNGGYTRIIRTIRRRGDNAEMAIIE 114
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_RUTMC (50S ribosomal protein L17 OS=Ruthia magnifica subsp. Calyptogena magnifica GN=rplQ PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 393 R+LNR + HR +M + M + L HE I TT++KAKE+RR+ + ++ K S+ R + +R D ++ KLFTELA YKDR GGY R+L++ R GD A MA ++ VD Sbjct: 8 RQLNRNSSHRKAMFKNMANSLFLHETIRTTLSKAKELRRVVEPLITKAKIDSVANRRNIFSKLRDDAIVAKLFTELAPFYKDRPGGYIRILKAGFRAGDKALMAIVQLVD 117
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_PROMM (50S ribosomal protein L17 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 67 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 390 KL RPT R +MLR + +QL++ R+ TT A+AK +R A+ M+ L K GSL + RRA ++ ++H LF + RY DR GGYTR++R+ R GD A MA IE V Sbjct: 9 KLGRPTDQRKAMLRGLTTQLIREGRVTTTKARAKALRDEAERMITLAKNGSLASRRRAIGYIYDKQLVHALFDKAQDRYGDRQGGYTRIIRTVPRRGDNAEMAIIELV 116
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_PROM3 (50S ribosomal protein L17 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 67 KLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 390 KL RPT R +MLR + +QL++ R+ TT A+AK +R A+ M+ L K GSL + RRA ++ ++H LF + RY DR GGYTR++R+ R GD A MA IE V Sbjct: 9 KLGRPTDQRKAMLRGLTTQLIREGRVTTTKARAKALRDEAERMITLAKNGSLASRRRAIGYIYDKQLVHALFDKAQDRYGDRQGGYTRIIRTVPRRGDNAEMAIIELV 116
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_EHRCJ (50S ribosomal protein L17 OS=Ehrlichia canis (strain Jake) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGK----EGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 RK +R + HRM+ML M L+KHERI TT+ KAKE+R + ++ +GK + + R + ++ D +KL L+ RYK R GGYTR++++ R GD+APMA IE VDR Sbjct: 8 RKFSRTSAHRMAMLLNMCISLIKHERISTTLPKAKELRPYVEKLITIGKVYHGKNLVYGKRLLISKIKNPDAANKLIDVLSIRYKSRNGGYTRIIKNGFRKGDSAPMAIIELVDR 122 The following BLAST results are available for this feature:
BLAST of CX296777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296777 ID=CX296777; Name=CX296777; organism=Citrus clementina; type=EST; length=694bpback to top |