CX296777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_GLUOX (50S ribosomal protein L17 OS=Gluconobacter oxydans GN=rplQ PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.925e-25 Identity = 58/111 (52.25%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 RKLN + HR +M R M L+KHE+I TT+ KAKE+R + + ++ LGK G L A R+A A +R D V+ KLF+ +A RYK RAGGY+R+L++ +R GD A MA IE VDR Sbjct: 8 RKLNVTSSHRAAMFRNMAVALIKHEQITTTLPKAKELRPVVEKLITLGKRGDLHARRQAFAQLRDDAVVTKLFSAVAERYKGRAGGYSRVLKAGVRYGDNADMAVIELVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHISS (50S ribosomal protein L17 OS=Shigella sonnei (strain Ss046) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHIFL (50S ribosomal protein L17 OS=Shigella flexneri GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHIF8 (50S ribosomal protein L17 OS=Shigella flexneri serotype 5b (strain 8401) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHIDS (50S ribosomal protein L17 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHIBS (50S ribosomal protein L17 OS=Shigella boydii serotype 4 (strain Sb227) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHIB3 (50S ribosomal protein L17 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHEFN (50S ribosomal protein L17 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL R+++R GGYTR+L+ +R GD APMAYIE V R Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEIIKTTVAKAKELRRVVEPLITLAKVDSVANRRLAFARTRDAEVVGKLFTELGPRFQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHEDO (50S ribosomal protein L17 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL R+++R GGYTR+L+ +R GD APMAYIE V R Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEIIKTTVAKAKELRRVVEPLITLAKVDSVANRRLAFARTRDAEVVGKLFTELGPRFQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALTY (50S ribosomal protein L17 OS=Salmonella typhimurium GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121 The following BLAST results are available for this feature:
BLAST of CX296777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296777 ID=CX296777; Name=CX296777; organism=Citrus clementina; type=EST; length=694bpback to top |