CX296777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALTI (50S ribosomal protein L17 OS=Salmonella typhi GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALSV (50S ribosomal protein L17 OS=Salmonella schwarzengrund (strain CVM19633) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALPK (50S ribosomal protein L17 OS=Salmonella paratyphi A (strain AKU_12601) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALPC (50S ribosomal protein L17 OS=Salmonella paratyphi C (strain RKS4594) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALPB (50S ribosomal protein L17 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALPA (50S ribosomal protein L17 OS=Salmonella paratyphi A GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALNS (50S ribosomal protein L17 OS=Salmonella newport (strain SL254) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALHS (50S ribosomal protein L17 OS=Salmonella heidelberg (strain SL476) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALG2 (50S ribosomal protein L17 OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SALEP (50S ribosomal protein L17 OS=Salmonella enteritidis PT4 (strain P125109) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121 The following BLAST results are available for this feature:
BLAST of CX296777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296777 ID=CX296777; Name=CX296777; organism=Citrus clementina; type=EST; length=694bpback to top |