CX296779

Overview
NameCX296779
Unique NameCX296779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACCR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACCQ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain Q1) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACC7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain AH187) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACC3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain 03BB102) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACC2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain G9842) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACC0 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain AH820) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACAN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACAH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACAC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
[Close]
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACAA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain A0248) GN=ispF PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 
Query:  230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL      +N+ A T EK+   G    IA+  V+LL
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
The following BLAST results are available for this feature:
BLAST of CX296779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_BACCR4.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACCQ4.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC74.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC34.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC24.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC04.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAN4.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAH4.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAC4.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAA4.633e-3848.702-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionC05802G03SK FerrChloL1 Citrus clementina cDNA clone C05802G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296779 ID=CX296779; Name=CX296779; organism=Citrus clementina; type=EST; length=691bp
GATGGCCGCTCAATCATACACCACCATTCCTCTCTACAGCAAAATTACGA
ATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCCTCGTAGCTTAACC
GCCAAACATCTCCGCACAACACAGTCAACGTCGCTGCCTCGTATTTCAGT
TTCAGCTGCAGCCACTTCTTCCATCGAAGTTAAAGAGTCATCGGCTTCGA
TCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGTGGGCCACGGGTTT
GATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCATCGGTGGAATCAA
TGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGACGGTGATGTTTTGC
TTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGGTCTTCCTGATATT
GGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGGGTGCACCATCCTC
TGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAGGCCGGCTATGAGA
TTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACCAAAATTGAGCCCA
TACAAGGAGACTATCCGAACCAACTTGTCTGAACTGCTAGGAGCAGACCC
CACCGTTGTAAATCTGACAGCGCACACTCATGAAAAAGTTGATAGCCTTG
GTGAAAATCGAAGTATTGCAGCTCACACTGTGATCCTTCTC
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