CX296779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispF PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.051e-38 Identity = 74/154 (48.05%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H G PLIIGG+ +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+ A T EK+ G IA+ V+LL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGVTIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_ACIBL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acidobacteria bacterium (strain Ellin345) GN=ispF PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.051e-38 Identity = 76/153 (49.67%), Postives = 102/153 (66.67%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 RVG GFD H G PL IGG+ +PH G HSDGDVLLH + DA+LGA+ DIG FP SDPKWKGA S VFI+EA+R ++ AGY +GN+D +L+L PK+ P+ + I+ ++++LL +PT V + A T E L + + AH V+LL Sbjct: 3 RVGLGFDSHEFREGIPLRIGGLTIPHTHGLSGHSDGDVLLHAITDALLGAVAAGDIGAFFPPSDPKWKGANSVVFIEEAMRHIETAGYRVGNVDCSLVLNAPKIGPHAKAIQESVAKLLKIEPTAVGIKAKTPE---GLNLDGTALAHVVVLL 152
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACC4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispF PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.903e-38 Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+ A T EK+ G IA+ V+LL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWGFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_PELCD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ispF PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.032e-37 Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+GHG+D+H+L LI+GG+++PH G HSD DVLLH + DAILGALG DIG+ FPD+DP +KG S + E +RL + GY +GNLDAT+I QRPKL+P+ +R N++E G D + +N+ A T E++ G I++H V+LL Sbjct: 3 RIGHGYDVHQLVAERKLILGGVDIPHTLGLLGHSDADVLLHAICDAILGALGEGDIGKHFPDTDPAYKGISSIKLLHEVMRLAETKGYRLGNLDATIIAQRPKLAPFIGNMRENIAEACGTDVSRINVKATTTEQLGFEGRGEGISSHAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BORA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella avium (strain 197N) GN=ispF PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.032e-37 Identity = 78/156 (50.00%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 224 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 +PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DAILGA GL DIG+ FPD+DP++KGA S V ++EA+ +D AG+++ N+DAT+ Q PK+ P+ + N++ LG +VN+ A T+E + LG IAA V LL Sbjct: 3 IPFRVGQGFDVHALVTGRPLIIGGVRIEHSHGLLGHSDADVLLHAVTDAILGAAGLGDIGRHFPDTDPRFKGADSRVLLREAMARVDAAGWQVVNVDATVHAQAPKIGPHAPAMVANIAADLGIAHDLVNIKAKTNEGLGYLGRKEGIAATVVTLL 158
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_GEOSW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus sp. (strain WCH70) GN=ispF PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.348e-37 Identity = 74/154 (48.05%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H+L G PLIIGG+ +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+D +K A S++ +K+ L+ + GYE+ NLD T+I Q+PK++P+ E ++ N++ LL + + VN+ A T EK+ G IAA V+LL Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGVRIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGKHFPDTDECYKDADSALLLKQVWELVKQQGYELANLDCTIIAQKPKMAPHIEQMKENIANLLEGELSQVNVKATTTEKLGFTGREEGIAAQAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_GEOMG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ispF PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.348e-37 Identity = 75/153 (49.02%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+GHG+D+H L G LI+GG++VP+ERG HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L + GY +GN+DAT++ QRPKL+P+ +R NL+E L A+ +N+ A T E++ G IAA+ V+L+ Sbjct: 2 RIGHGYDVHCLVEGRKLILGGVDVPYERGLLGHSDADVLLHAIADAILGALALGDIGKHFPDTDPQFKGADSRKLLRHVMALAGQKGYVLGNVDATIVAQRPKLAPFIPEMRANLAEDLIAEIDRINVKATTTEQLGFAGRGEGIAAYAVVLM 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_RALPJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia pickettii (strain 12J) GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37 Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 224 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + +AGY +GN+DAT+I Q+PKL+P+ + NL+E LG P N+ A T+EK+ G+ I A V+L+ Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVHKAGYAVGNVDATVIAQKPKLAPHVPGMVANLAEDLGIAPERCNVKAKTNEKLGFEGKEEGIVAQAVVLI 159
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACCN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37 Identity = 74/154 (48.05%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H G PLIIGGI +P+E+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+ A T EK+ G IA+ V+LL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPYEKGLLGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_THEEB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37 Identity = 72/156 (46.15%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 224 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 + R+G+G+D+HRL P PLI+GGI + H G HSD DVL H ++DA+LGAL L DIG FP SDP+W GA S V + + L+ E G+ +GN+DA ++ +RPKL PY + +R L+ LG D +++ A T+EK+ +G IAA+ V LL Sbjct: 2 MKIRIGNGYDIHRLVPERPLILGGIRLEHACGLLGHSDADVLTHAIMDALLGALSLGDIGHYFPPSDPQWAGADSQVLLAKVAALIAERGWRVGNIDAVVVAERPKLKPYLDPMRDRLATTLGIDRDQISIKATTNEKLGPVGREEGIAAYAVALL 157 The following BLAST results are available for this feature:
BLAST of CX296779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296779 ID=CX296779; Name=CX296779; organism=Citrus clementina; type=EST; length=691bpback to top |