CX296779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_HELP2 (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori (strain P12) GN=ispDF PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.494e-28 Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSI 667 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DAILGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++L A T EK+ +G+ + Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAILGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELFEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQISLKATTMEKMGFIGKQEGL 392
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_BARHE (Bifunctional enzyme ispD/ispF OS=Bartonella henselae GN=ispDF PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.494e-28 Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAA 673 R G+G+D+H E G LI+ GI +P + HSD DV LH + DA+L G DIG FP SDP+W+ S +F++ A+ ++ +AG I N+D TLI + PK+ PY+ + NL +L P +++ A T+EK+ +G IAA Sbjct: 237 RTGNGYDVHSFEEGNSLILCGIKIPFHKKLNGHSDADVALHALTDALLATRGAGDIGTHFPPSDPQWQNVSSEIFLRHALDIVKQAGGRIANVDITLIAEEPKIGPYRHAMVGNLMNMLTILPDRISIKATTNEKLGFIGRGEGIAA 383
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_HELPJ (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori J99 GN=ispDF PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.951e-28 Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSI 667 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DAILGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++L A T EK+ +G+ + Sbjct: 252 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAILGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELLEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQISLKATTMEKMGFIGKQEGL 395
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_HELPH (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori (strain HPAG1) GN=ispDF PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.951e-28 Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSI 667 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DA+LGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++L A T EK+ +G+ + Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAVLGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELFEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQISLKATTMEKMGFIGKQEGL 392
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMC5 (Bifunctional enzyme ispD/ispF OS=Campylobacter curvus (strain 525.92) GN=ispDF PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.951e-28 Identity = 61/144 (42.36%), Postives = 90/144 (62.50%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 G GFD H E G L + G + +E G +AHSDGDV LH + DAILGA GL DIG++FPD+D ++KG S + ++EA + + G+E+ N D T++ +RPK+S +K + N++ L P +N+ A T EK+ +G IA Sbjct: 214 GIGFDAHEFERGRELWLCGEKIEYEFGLKAHSDGDVALHALTDAILGAAGLGDIGELFPDTDAEFKGISSLLLLQEAYKKVQSVGFELVNADITIMAERPKISKFKRKMEANIAGALNLAPNRINVKATTTEKLGFVGRGEGIA 357
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_RHOS5 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=ispF PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28 Identity = 61/149 (40.94%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 224 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 + R G+GFD+H PG + + G+ VPH RG HSD DV +H + DAI GAL DIG FP SDP+WKGA S +F++ A+ + G+ + N D TLI +RPK+ P +R L+ ++G + +++ A T EK+ G IA Sbjct: 1 MDIRTGNGFDVHAFGPGDHVWLCGVRVPHHRGLIGHSDADVGMHALTDAIYGALAEGDIGVHFPPSDPQWKGAASRIFLEHAMGRIAARGFTLANCDVTLICERPKIGPMAPAMREALAAIMGVEVGRISVKATTSEKLGFTGREEGIA 149
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_PELTS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ispF PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28 Identity = 60/153 (39.22%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 RVG G+D+H+L G PL++GG+++P +G HSD DVL H V+DA+LGA G DIG+ FPD+D ++KG S + ++ G + N+D+ ++ Q PKLSP+ E ++ ++ L P+ V++ A T E + G+ IAA+ V L+ Sbjct: 2 RVGFGYDVHKLVEGRPLVLGGVSIPFVKGLLGHSDADVLAHAVMDALLGAAGAGDIGRHFPDNDGRYKGISSMKLLARVGDILSRQGLAVVNIDSVVVAQGPKLSPFIEEMQKRMAGALQIQPSQVSVKATTTEGLGFAGKGEGIAAYAVALV 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_HELAH (Bifunctional enzyme ispD/ispF OS=Helicobacter acinonychis (strain Sheeba) GN=ispDF PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28 Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSI 667 +G GFD H P+++GG+ + E G +AHSDGD LLH ++DAILGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++L A T EK+ +G+ + Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAMIDAILGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELFEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQISLKATTMEKMGFIGQQEGL 392
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMC1 (Bifunctional enzyme ispD/ispF OS=Campylobacter concisus (strain 13826) GN=ispDF PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28 Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 VG GFD+H E G PL++ G + +E G +AHSDGDV LH + DAILGA GL DIG++FPD+D K+K S ++EA + + G+ + N D T++ Q+PKLS K + N+++ L + +N+ A T E + +G IA Sbjct: 213 VGSGFDVHEFEKGRPLVLCGEKIDYEFGLKAHSDGDVALHALTDAILGAAGLGDIGELFPDTDDKFKDISSIYLLQEAYKRVQSVGFVLTNADITIMAQKPKLSKLKSKMEANIAQALNLSQSRINVKATTTEGLGFVGRCEGIA 357
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_THET8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ispF PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.328e-28 Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHE 634 R+G+G D HRLE G PL + G+ +P G AHSDGD LH + DA+L A GL DIG +FPD+DP+W+G S VF++EA+RL++ G ++ L L RPKL P+++ + +LS LL + LT T E Sbjct: 2 RIGYGEDSHRLEEGRPLYLCGLLIPSPVGALAHSDGDAALHALTDALLSAYGLGDIGLLFPDTDPRWRGERSEVFLREALRLVEARGAKLLQASLVLTLDRPKLGPHRKALVDSLSRLLRLPQDRIGLTFKTSE 135 The following BLAST results are available for this feature:
BLAST of CX296779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296779 ID=CX296779; Name=CX296779; organism=Citrus clementina; type=EST; length=691bpback to top |