CX296779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BLOPB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Blochmannia pennsylvanicus (strain BPEN) GN=ispF PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27 Identity = 59/153 (38.56%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+G+GFD+H+ PL IGG+++P +G +AHSDGDV++H ++DA+LGA DIG +FPD+D K+ S ++ A + G+ + N+D T+ILQ PK++ Y ++ +LS+ L T +N+ A T + + +G + IA V+LL Sbjct: 3 RIGYGFDVHQFGGCRPLTIGGVSIPCMKGIKAHSDGDVMMHSLIDALLGAACCGDIGSMFPDTDAKYNNIDSRKLLRIAWEKITMQGFLLENIDITVILQIPKINTYIYQMKHHLSQDLNCSVTSINIKATTTDTLGYIGRSEGIACIAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_SACD2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ispF PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.071e-26 Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+G G D+H G ++IGG+ +P+ERG AHSDGDVLLH + DA+LGA L DIG+ FPD+D +K A S ++ + GY + N D T++ Q PK++P+ +R ++E L +N+ A T E++ G I A +L+ Sbjct: 2 RIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAEDLDTHIDNINVKATTTEQLGFNGRKEGITALATVLI 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJD (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=ispDF PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.071e-26 Identity = 57/144 (39.58%), Postives = 90/144 (62.50%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIA 670 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA L DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N+ A T EK+ +G +A Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAVLGDIGELYPDTDMKFKNANSMELLKQAYDKVREVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMA 356
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_EHRCR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia chaffeensis (strain Arkansas) GN=ispF PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.398e-26 Identity = 62/159 (38.99%), Postives = 93/159 (58.49%), Query Frame = 2 Query: 230 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVIL 688 F+VG G+D+H+ + + I GI + + + AHSDGDV LH + DAILGA+G IGQ FP++D WK S F+ EA + E GY I N D T+I ++PK+ P+ ++ ++ L+ DP+ +N+ A T EK+ LG IAA ++L Sbjct: 10 FKVGIGYDVHKFDNTCYNDANTFITICGIKINYHKKIIAHSDGDVGLHALTDAILGAVGCGSIGQHFPNTDNTWKNIKSDYFLIEAQKKAQEKGYSISNADITIICEQPKIMPHALEMQEYIANLICIDPSCINVKATTTEKLGFLGRKEGIAAQAIVL 168
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_EHRCJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia canis (strain Jake) GN=ispF PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.398e-26 Identity = 63/159 (39.62%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 230 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVIL 688 F+VG G+D+H+ + + I GI + H + AHSDGDV LH + DAILGA+G IGQ FP++D KWK A S F+ EA E GY I N D +I ++PK+ P+ ++ ++ L+ D + +N+ A T EK+ LG IAA ++L Sbjct: 10 FKVGIGYDVHKFDNIEYDATNTFITICGIKINHHKKIVAHSDGDVGLHALTDAILGAVGCGSIGQHFPNTDNKWKDAKSDYFLIEAKNKAQEKGYYISNADIIIICEQPKIMPHALKMQEYIANLIKIDTSCINVKATTTEKLGFLGRKEGIAAQAIVL 168
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_CELJU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=ispF PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.398e-26 Identity = 55/156 (35.26%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 224 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 + R+G G+D+H G ++IGG+ +PH G AHSDGDVLLH + DA+LGA+ L DIG+ FPD+D +++ A S ++ + + G+++ N D T++ Q P+++ Y + ++ L + + +N+ A T E++ G IA + V+LL Sbjct: 1 MSMRIGQGYDVHAFGEGEKIVIGGVVIPHHHGLVAHSDGDVLLHALCDALLGAVALGDIGKHFPDTDMQYRNADSRSLLRMVYAKVSQHGWKLANADMTIVAQAPRMASYIPHMVEVIASDLQSSASQINVKATTSERLGFTGREEGIACYAVVLL 156
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_SULDN (Bifunctional enzyme ispD/ispF OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=ispDF PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.826e-26 Identity = 57/143 (39.86%), Postives = 86/143 (60.14%), Query Frame = 2 Query: 239 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSI 667 G GFD+H + + +GGI + E G AHSDGDV +H ++DA+LGA G+ DIG +FPD+D K+KGA S + V + G+ I N+D T+ ++P++ YK +R +S +LG D VN+ A T EK+ +G + Sbjct: 228 GVGFDVHAFDDKGEMFLGGIKIDSEYGFLAHSDGDVAIHALIDALLGAAGMGDIGMMFPDNDVKYKGADSKELLGTLVTKLRHFGFVIVNVDITIAAEKPRIGNYKMAMRKKISSILGIDAQRVNIKATTTEKLGFIGRGEGV 370
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_HELHP (Bifunctional enzyme ispD/ispF OS=Helicobacter hepaticus GN=ispDF PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 54/150 (36.00%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 236 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVI 685 +G+G D+H+ E + +GG+ + G +AHSDGDV+LH + DAILGA+G DIG+ FPD+D +K A S + + E GYE+ N D ++I Q PK++PYK +R ++ +L +N+ A T E + +G + + Sbjct: 225 IGNGIDVHQFEKNKQMWLGGVEIESPFGFKAHSDGDVVLHALSDAILGAIGGGDIGEWFPDTDETYKNADSKMMLSEIYTFAQSVGYELYNADISIIAQTPKIAPYKSAMRECIARILRVPNAHINIKATTTEGLGFVGREEGVCVEACV 374
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_DESMR (Bifunctional enzyme ispD/ispF OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=ispDF PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 2 Query: 239 GHGFDLHRL--------EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVI 685 G+G+D+HR +P P+ +GG + AHSDGDVLLH + DA+LG + DIG++FPDS+P + S VF+ EA+ G I ++D T+I Q PK+SP+ E IR N++ LLG + VNL A T E + GE + I A ++ Sbjct: 238 GYGYDVHRYADPRNPGKQPPRPMKLGGFPILGAPEVLAHSDGDVLLHALTDAVLGCVAGGDIGRLFPDSNPDFDNMASGVFLSEALLAAKAKGLTITHVDLTIIAQIPKISPHAEAIRLNVAALLGLNKEQVNLKATTEEGLGFTGEKKGIKAVALV 394
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_SPHWW (Bifunctional enzyme ispD/ispF OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=ispDF PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTV 682 R GFD+H G + +GG+ + H+R HSD DV LH + DA+LG + DIG FP SD +WKGA S++F+ A L+ AG + +D T+I + PK+ P++ IR ++ LLG V++ A T E++ G IAA V Sbjct: 225 RTAMGFDVHGFTAGDGVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDQRWKGADSAMFLAHARDLVAAAGGIVDFVDLTIICEAPKVGPHRAAIRDRIAALLGLTAGQVSVKATTTERLGFTGRREGIAAQAV 374 The following BLAST results are available for this feature:
BLAST of CX296779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296779 ID=CX296779; Name=CX296779; organism=Citrus clementina; type=EST; length=691bpback to top |