CX296786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCA_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Neurospora crassa GN=8D4.130 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.802e-56 Identity = 110/189 (58.20%), Postives = 134/189 (70.90%), Query Frame = 1 Query: 148 RLSSSAAPAAHSRNYGSSAAASHPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 714 +L + A+S N S AA+ + ++ +T+V+ QG TGK GTFH +QAIEYGT +VGG PKK G HL PVF++V+EA ET A A+ I+VPPP + L VCITEGIPQHDMVR+ + L QSKTRL+GPNCPGII PG+CKIGIMPG+IHK GR+GIVSRSGTLTYEAV QT Sbjct: 13 KLVQQLSKRAYSSN-SSPYAATINNLKINGDTKVLFQGFTGKQGTFHAQQAIEYGTNVVGGTNPKKAGQTHLDRPVFSNVSEAVKETGATATAIFVPPPLAAAGIEEALQAEIPLAVCITEGIPQHDMVRITSMLKTQSKTRLVGPNCPGIIAPGQCKIGIMPGFIHKRGRIGIVSRSGTLTYEAVNQT 200
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_PSEAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.073e-56 Identity = 109/165 (66.06%), Postives = 124/165 (75.15%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 714 +V ++K+T+VICQG TG GTFH+EQAI YGTKMVGGVTP KGGT HLGLPVFN+V EA T A ASVIYVP PF + L+VCITEGIP DM+ K + + RLIGPNCPG+I PGECKIGIMPG+IH PG+VGIVSRSGTLTYEAV QT Sbjct: 2 SVLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVKEAVEATGAEASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCD-ELGVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQT 165
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_BACSU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Bacillus subtilis GN=sucD PE=1 SV=3) HSP 1 Score: 214.542 bits (545), Expect = 4.438e-55 Identity = 109/164 (66.46%), Postives = 124/164 (75.61%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +VF++K+TRVI QGITG FHT+Q +EYGT +VGGVTP KGGTE G+PVFN+VAEA T ANASVIYVP PF LDLV+CITE IP DMV+VK + + KTRLIGPNCPG+I P ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q Sbjct: 2 SVFINKDTRVIVQGITGSTALFHTKQMLEYGTNIVGGVTPGKGGTEAEGVPVFNTVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGK-KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQ 164
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCA_CAEEL (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=C05G5.4 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.438e-55 Identity = 105/162 (64.81%), Postives = 125/162 (77.16%), Query Frame = 1 Query: 229 VDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 714 ++K+T+VI QG TGK GTFH +Q +EY TK+VGGV K GTEHLGLPVF +V+EA+ +T A+ASVIYVP + LVVCITEGIPQHDMVRVK+ L +Q+KTRL+GPNCPGII +CKIGIMPG+IHK G +GIVSRSGTLTYEAV QT Sbjct: 30 INKDTKVIVQGFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKNVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQNKTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQT 191
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_HAEIN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Haemophilus influenzae GN=sucD PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.757e-54 Identity = 103/165 (62.42%), Postives = 123/165 (74.55%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 714 A+ +DKNT+VICQG TG GTFH+EQA+ YGT++VGGV+P KGGT HLGLPVFN+V EA T A+VIYVP F + L+VCITEGIP DM++VK LN ++ +IGPNCPG+I P ECKIGIMP +IHK G+VGIVSRSGTLTYEAV QT Sbjct: 2 AILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKGGTTHLGLPVFNTVREAVENTGVTATVIYVPASFCKDAIIEAIDAGIQLIVCITEGIPTLDMLKVKQKLN-ETGVVMIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQT 165
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_STAAW (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MW2) GN=sucD PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 103/164 (62.80%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQ 164
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_STAAS (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=sucD PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 103/164 (62.80%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQ 164
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_STAAR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=sucD PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 103/164 (62.80%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQ 164
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_STAAN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain N315) GN=sucD PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 103/164 (62.80%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQ 164
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_STAAM (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sucD PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52 Identity = 103/164 (62.80%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 220 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQ 164 The following BLAST results are available for this feature:
BLAST of CX296786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296786 ID=CX296786; Name=CX296786; organism=Citrus clementina; type=EST; length=718bpback to top |