CX296786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCA1_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial OS=Trichomonas vaginalis GN=ALPHA-SCS1 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.364e-40 Identity = 85/167 (50.90%), Postives = 113/167 (67.66%), Query Frame = 1 Query: 217 PAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 714 P +F+DK+T+V+ QGI G G FH+ +YGTK+VG V PKK GT GLP+F ++ E T ANAS+I+VP P + LVVCITE IPQHDM++VK + +++ +LIGPNCPG+I+PG K+GI+P I G++GIVSRSGTLTYEA + T Sbjct: 13 PLLFIDKDTKVVIQGI-GNQGQFHSRLMRQYGTKVVGAVHPKKAGTIIAGLPIFKNMKEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVM-KETGCQLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYAT 177
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCA2_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial OS=Trichomonas vaginalis GN=ALPHA-SCS2 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 85/167 (50.90%), Postives = 113/167 (67.66%), Query Frame = 1 Query: 217 PAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 714 P +F+DK+TRV+ QGI G G +H+ EYGTK+VG V PKK G GLP+F ++ E T ANAS+I+VP P + LVVCITE IPQHDM++VK + +++ +LIGPNCPG+I+PG K+GI+P I + G++GIVSRSGTLTYEA + T Sbjct: 13 PLLFIDKDTRVVIQGI-GNQGQYHSRLMREYGTKVVGAVHPKKAGKIIAGLPIFKNMKEVVKRTDANASLIFVPAPGAAAACIEAAEAGMGLVVCITEHIPQHDMIKVKKVM-KETGCQLIGPNCPGLIQPGTHTKLGIIPTNIFRNGKIGIVSRSGTLTYEAAYAT 177
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCA3_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit alpha-3, mitochondrial OS=Trichomonas vaginalis GN=ALPHA-SCS3 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.878e-40 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 1 Query: 217 PAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQT 714 P +F+DK+T+V+ QGI G G FH+ +YGTK+VG V PKK G+ GLP+F ++ E T ANAS+I+VP P + LVVCITE IPQHDM++VK + +++ +LIGPNCPG+I+PG K+GI+P I G++GIVSRSGTLTYEA + T Sbjct: 13 PLLFIDKDTKVVIQGI-GNQGQFHSRLMRQYGTKVVGAVHPKKAGSIIAGLPIFKNMKEVVKRTDANASLIFVPAPGAAAACIEAAQAGMGLVVCITEHIPQHDMIKVKKVM-KETGCQLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYAT 177
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_METJA (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Methanocaldococcus jannaschii GN=sucD PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 81/163 (49.69%), Postives = 105/163 (64.42%), Query Frame = 1 Query: 223 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 + +D+NT+ I QGITG+ G+FHT++ +E GTK+VGGVTP KGG G+PVF++V EA ET ANASVI+VP PF ++L+V ITE IP HD + ++IGPN PGI P K+GI+P + K G VG+VSRSGTLTYE Q Sbjct: 8 ILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEF-VNYAEDVGVKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLTYEIAHQ 169
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_MYCTU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium tuberculosis GN=sucD PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34 Identity = 79/177 (44.63%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 211 SHPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---------EHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAA-LNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +H ++F+ ++ +VI QGITG T HT + + GT++VGGV +K GT + LPVF SVAEA +T A+ S+I+VPP F + L+V ITEGIP D A L KTR+IGPNCPGII PG+ GI P I PG +G+VS+SGTLTY+ +F+ Sbjct: 2 THMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE 178
BLAST of CX296786 vs. ExPASy Swiss-Prot
Match: SUCD_MYCBO (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium bovis GN=sucD PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34 Identity = 79/177 (44.63%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 211 SHPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT---------EHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAA-LNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 711 +H ++F+ ++ +VI QGITG T HT + + GT++VGGV +K GT + LPVF SVAEA +T A+ S+I+VPP F + L+V ITEGIP D A L KTR+IGPNCPGII PG+ GI P I PG +G+VS+SGTLTY+ +F+ Sbjct: 2 THMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE 178 The following BLAST results are available for this feature:
BLAST of CX296786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296786 ID=CX296786; Name=CX296786; organism=Citrus clementina; type=EST; length=718bpback to top |