CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_CORA7 (3-isopropylmalate dehydrogenase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=leuB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28 Identity = 63/154 (40.91%), Postives = 99/154 (64.29%), Query Frame = -2 Query: 282 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIA---EGKYRTADLG 728 +HK N++ GL+ EVA+++PE+T + ID + +V +PA +DV+V NL+GDI++DL + GG+GL S NI G ++ E VHGSAPDIAGK +A+PTA +LS+ +LRHL + A RI+ A+ + ++ + + RT ++G Sbjct: 177 VHKTNVLVNAGGLWQRTVNEVAQEFPEVTVDYNHIDAATIYMVTDPARYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDASGANPSMFEPVHGSAPDIAGKGIADPTAAILSAAMLLRHLGDEENAVRIEEAVAADVSARGDAQARTTEIG 330
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_THIFE (3-isopropylmalate dehydrogenase OS=Thiobacillus ferrooxidans GN=leuB PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 69/162 (42.59%), Postives = 101/162 (62.35%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN+++ T L+ V EVA YP++ + +DN M L++ PA FDVL+ N++GDI+SD + L G +G+ PS ++GEG A+ E +HGSAPDIAG++ ANP A +LS MLRH L A R++ A+ + +G RTAD+ T TKA+ Sbjct: 188 VDKANVLETTR-LWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLGEGR-AMYEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEAAVQRVLDQG-LRTADIAAPGTPVIGTKAM 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_RALEJ (3-isopropylmalate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=leuB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 64/149 (42.95%), Postives = 98/149 (65.77%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN+++ T + + +V+++YP++ + +DN M LVK P +FDV+V N++GDI+SD A L G +G+ PS ++ L E HGSAPDIAGK +ANP A +LS+ MLR+ L ++ADRI+NA+ +A+G YRT D+ Sbjct: 188 VDKANVLE-TFQFWKDIVIDVSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVTGNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNKAEQADRIENAVKKVLAQG-YRTGDI 334
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_CHRVO (3-isopropylmalate dehydrogenase OS=Chromobacterium violaceum GN=leuB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 63/149 (42.28%), Postives = 98/149 (65.77%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN+++ T+ + + EVA++YP++ + +DN M LV+NP FDV+V N++GDI+SD + L G +G+ PS ++ + L E HGSAPDIAG+NLANP A +LS+ MLR+ A R+++A+ +A+G YRTAD+ Sbjct: 187 VDKANVLETTE-FWKEIMIEVAKEYPQVELSHMYVDNAAMQLVRNPKQFDVMVTGNIFGDILSDEASMLTGSIGMLPSASLDQNNKGLYEPSHGSAPDIAGQNLANPLATILSAAMMLRYSFGQEAAARRVEDAVKKVLAQG-YRTADI 333
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BACSU (3-isopropylmalate dehydrogenase OS=Bacillus subtilis GN=leuB PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 67/166 (40.36%), Postives = 106/166 (63.86%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + KAN+++ + L+ V +VA+++P++ E +++DN M L+ P FDV+V N++GDI+SD + L G LG+ PS ++ G+ L E VHGSAPDIAGK +ANP A +LS+ +LR L ++A +++A+ +A GK RT DL S S T+AI + + Sbjct: 190 VDKANVLESSR-LWREVAEDVAQEFPDVKLEHMLVDNAAMQLIYAPNQFDVVVTENMFGDILSDEASMLTGSLGMLPSASLSSSGLHLFEPVHGSAPDIAGKGMANPFAAILSAAMLLRTSFGLEEEAKAVEDAVNKVLASGK-RTRDLARSEEFSS-TQAITEEV 352
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_WOLSU (3-isopropylmalate dehydrogenase OS=Wolinella succinogenes GN=leuB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27 Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN++ + L+ +A++YPE+ + IDN M L++NP FDV++ NL+GDI+SD + L G +GL PS +IG G AL E +HGSAPDIAG+ +ANP A + S+ MLRH L + AD I AI+ T+ EG YRT D+ Sbjct: 186 VDKANVLDVSQ-LWRETVTRIAKEYPEVELSHMYIDNAAMQLIRNPKQFDVILTGNLFGDILSDEASMLSGSIGLLPSASIG-GKAALYEPIHGSAPDIAGQGIANPIATIASASMMLRHSLGEVEAADAIDKAIVKTLKEG-YRTKDI 331
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_THIDA (3-isopropylmalate dehydrogenase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=leuB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = -2 Query: 270 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELH-DKADRIQNAILSTIAEGKYRTADLGGSST 728 + KAN+++ ++ L+ + EVA+ YPE+ + +DN M L++ P FD +V N++GDI+SD + L G +G+ PS ++ E + E +HGSAPDIAGKNLANP A +LS M R+ ADRI+NA+ IA+G YRT D+ T Sbjct: 186 VEKANVLECSE-LWKEIMIEVAKDYPEVELSHMYVDNAAMQLIRAPKQFDTIVTGNIFGDILSDAASMLSGSIGMLPSASLDEHNKGMYEPIHGSAPDIAGKNLANPLATILSVAMMYRYTFADLATADRIENAVKQVIAKG-YRTGDIWTEGT 337
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_SYNJB (3-isopropylmalate dehydrogenase OS=Synechococcus sp. GN=leuB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27 Identity = 68/155 (43.87%), Postives = 97/155 (62.58%), Query Frame = -2 Query: 267 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 728 + KAN+++ + L+ +A +YPE+ + IDN M LV+ P FDV++ NL+GDI+SD A L G +G+ PS ++G G L E VHGSAPDIAG++ ANP A +LS MLR+ L+ ADRI+ A+ + +A+G YRT DL T Sbjct: 198 VDKANVLEVSQ-LWRERVNAIAAEYPEVELSHLYIDNAAMQLVRWPKQFDVILTGNLFGDILSDEAAMLTGSIGMLPSASLGSSGPGLYEPVHGSAPDIAGQDKANPIAQVLSGALMLRYSLDQPQAADRIEQAVEAVLAQG-YRTPDLYSEGMT 350
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_PELCD (3-isopropylmalate dehydrogenase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=leuB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27 Identity = 66/149 (44.30%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 728 I KAN++ T L+ V V+ YP++ + +DN M LVK P FDVL+ PN++GDI+SD A L G LG+ PS ++ EG + E GSAPDIAGKN+ANP A +LS+ +LR+ L D AD ++ A+ + +A G RT D+ Sbjct: 193 IDKANVLS-TSVLWREVVERVSADYPDVVLSHMYVDNAAMQLVKAPKQFDVLLCPNMFGDILSDEAAMLTGSLGMLPSASLAEGSFGMYEPAGGSAPDIAGKNIANPVAQILSAAMLLRYSCGLADAADAVEKAVENCLAAG-LRTGDI 339
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_NITOC (3-isopropylmalate dehydrogenase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=leuB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27 Identity = 66/164 (40.24%), Postives = 103/164 (62.80%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 + KAN+++ T+ L+ V EVA ++PE+ + +DN M LV+ P FDV+V N++GDI+SD A L G +G+ PS ++ + G + E +HGSAPDIAG+ +ANP A +LS MLR+ L+ +A R++ A+ + + +G RT D+ TT T A+ D Sbjct: 190 VDKANVLEATE-LWREVMSEVAAEFPEVELSHMYVDNAAMQLVRAPKQFDVVVTTNMFGDILSDCAAMLTGSIGMLPSASLDQSGRGMYEPIHGSAPDIAGQGIANPLATILSVAMMLRYSLDSPAQATRLEKAVGAVLDQG-LRTPDIYSPGTTQVSTGAMGD 351 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |