CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_CANMA (3-isopropylmalate dehydrogenase OS=Candida maltosa GN=LEU2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 56/170 (32.94%), Postives = 101/170 (59.41%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 + KAN++ + +V + ++E++P ++ + +ID+ M+L++NP + +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ N NP A +LS+ +MLR L+ +A+ ++ A+ + +G RTADL G+S+T++ AI + Sbjct: 196 LDKANVLASSRLWRRTVDKVISEEFPTLSVQHQLIDSAAMILIQNPTKLNGIIITSNMFGDIISDEASVIPGSLGLLPSASLASLPDTNTAFGLYEPCHGSAPDLPA-NKVNPIATILSAASMLRLSLDCVKEAEALEEAVKQVLDKG-IRTADLRGTSSTTEVGDAIVE 363
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3B_ASPNG (3-isopropylmalate dehydrogenase B OS=Aspergillus niger GN=leu2B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 56/171 (32.75%), Postives = 97/171 (56.73%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG--------EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + V ++ +YP++ + D+ +++ +P + V++ N +GD++SD LIG LG+ PS ++ E L E HGSAP IAGKN+ANPTA++L M R+ + ++A +I++A+ + + G RT DLGG+S+T +F A+ Sbjct: 194 LDKANVLASSRLWRRVVENTISVEYPQVKLVHQLADSASLIMATDPRVLNGVILADNTFGDMLSDQAGSLIGTLGVLPSASLDGLPHPGKQEKVRGLYEPTHGSAPTIAGKNIANPTAMILCVSLMFRYSFNMENEARQIEDAVRAVLDRG-LRTPDLGGNSSTQEFGDAV 363
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_STAES (Isocitrate dehydrogenase [NADP] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=icd PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = -2 Query: 234 AEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAE-----GKYRTADLGGSSTTSDFTKAICDHL 665 AE+ +I ++ + D ++ PA DV+ NL GD ISD A +GG+G+ P NI E G A+ EA HG+AP AG N NP++ +LSSV ML HL + AD+I ++I +TIA R D +TSDF + ++ Sbjct: 272 AEQEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSEILSSVLMLEHLGWQEAADKITDSIEATIASKIVTYDFARLMDGAKEVSTSDFADELIKNI 421
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_STAEQ (Isocitrate dehydrogenase [NADP] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=icd PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = -2 Query: 234 AEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAE-----GKYRTADLGGSSTTSDFTKAICDHL 665 AE+ +I ++ + D ++ PA DV+ NL GD ISD A +GG+G+ P NI E G A+ EA HG+AP AG N NP++ +LSSV ML HL + AD+I ++I +TIA R D +TSDF + ++ Sbjct: 272 AEQEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSEILSSVLMLEHLGWQEAADKITDSIEATIASKIVTYDFARLMDGAKEVSTSDFADELIKNI 421
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_YEAST (3-isopropylmalate dehydrogenase OS=Saccharomyces cerevisiae GN=LEU2 PE=1 SV=4) HSP 1 Score: 92.8189 bits (229), Expect = 1.994e-18 Identity = 57/172 (33.14%), Postives = 97/172 (56.40%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + KAN++ + +V + ++P + + +ID+ M+LVKNP + +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ KN NP A +LS+ ML+ L L ++ I++A+ + G RT DLGGS++T++ A+ + + Sbjct: 190 LDKANVLASSRLWRKTVEETIKNEFPTLKVQHQLIDSAAMILVKNPTHLNGIIITSNMFGDIISDEASVIPGSLGLLPSASLASLPDKNTAFGLYEPCHGSAPDLP-KNKVNPIATILSAAMMLKLSLNLPEEGKAIEDAVKKVLDAG-IRTGDLGGSNSTTEVGDAVAEEV 359
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_YARLI (3-isopropylmalate dehydrogenase OS=Yarrowia lipolytica GN=LEU2 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.994e-18 Identity = 55/163 (33.74%), Postives = 94/163 (57.67%), Query Frame = -2 Query: 261 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGE-----GGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSD 728 + KAN++ + +V R + +++P++ +ID+ M+L+K P+ + +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ GK NP A +LS+ ML+ L + D ++ A+ ++ G TAD+GGSS+TS+ Sbjct: 202 LDKANVLASSRLWRKTVTRVLKDEFPQLELNHQLIDSAAMILIKQPSKMNGIIITTNMFGDIISDEASVIPGSLGLLPSASLASLPDTNEAFGLYEPCHGSAPDL-GKQKVNPIATILSAAMMLKFSLNMKPAGDAVEAAVKESVEAG-ITTADIGGSSSTSE 362
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU31_BRAJA (3-isopropylmalate dehydrogenase 1 OS=Bradyrhizobium japonicum GN=leuB1 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.994e-18 Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGG-----IALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELH--DKADRIQNAILSTIAEGKYRTADL 728 + KAN+++ + V ++ ++ + +DN M +V+ P+ FDV+V N++GDI+SD A G LG+ PS ++G AL E VHGSAPDIAGK +ANP +LS MLR + LH + A ++ A+ + +A G RTAD+ Sbjct: 195 VDKANVLETSVLWREEVTALHEAEFSDVELTHLYVDNAAMQIVRAPSQFDVMVTCNIFGDILSDCAAMASGSLGMLPSVSLGPPDRLGRRKALYEPVHGSAPDIAGKGIANPLGSILSVAMMLR-ITLHRPEDAALLEKAVDTALAAGA-RTADI 347
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_DEBHA (3-isopropylmalate dehydrogenase OS=Debaryomyces hansenii GN=LEU2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.401e-18 Identity = 57/170 (33.53%), Postives = 98/170 (57.65%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 + KAN++ + +V + ++E++P++T + +ID+ M+LV++P + +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ +N NP A +LS MLR L+ +A+ ++ A+ + G RT DL GSS+T + AI + Sbjct: 205 LDKANVLASSRLWRTTVDKVMSEEFPQLTIQHQLIDSAAMILVQSPTKLNGIIITSNMFGDIISDEASVIPGSLGLLPSASLASLPDTNSAFGLYEPCHGSAPDLT-ENKVNPVATILSVAMMLRLSLDCVPEAEALEKAVGQVLDSG-IRTGDLRGSSSTKEVGDAIAE 372
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_CANGA (3-isopropylmalate dehydrogenase OS=Candida glabrata GN=LEU2 PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18 Identity = 56/168 (33.33%), Postives = 97/168 (57.74%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + +V + ++P++T + +ID+ M+LVKNP + +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ K NP A +LS+ ML+ L+L ++ + I+ A+ + G RTADL G+++T++ A+ Sbjct: 191 LDKANVLASSRLWRKTVEETIKNEFPQLTVQHQLIDSAAMILVKNPTHLNGIIITNNMFGDIISDEASVIPGSLGLLPSASLASLPDKNTAFGLYEPCHGSAPDLP-KGKVNPVATILSAAMMLKLSLDLFEEGEIIEQAVKKVLDSG-IRTADLKGTNSTTEVGDAV 356
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_ZYGRC (3-isopropylmalate dehydrogenase OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=LEU2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18 Identity = 58/168 (34.52%), Postives = 94/168 (55.95%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMP-NLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + +V + ++P++ +ID+ M+LVK+P + +V+ NL+GDIISD + + G LGL PS ++ L E HGSAPD+ K NP A++LS+ ML+ L L + + ++ A+ + G RT DLGGS++TS+ AI Sbjct: 188 LDKANVLASSRLWRKTVEETIKNEFPQLKLNHQLIDSAAMILVKSPTQLNGIVLTSNLFGDIISDEASVIPGSLGLLPSASLASLPDTNEAFGLYEPCHGSAPDLP-KGKVNPIAMILSAAMMLKLSLNLSKEGEAVEKAVKQVLDSG-VRTGDLGGSNSTSEVGDAI 353 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |