CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_ZYGBA (3-isopropylmalate dehydrogenase OS=Zygosaccharomyces bailii GN=LEU2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18 Identity = 55/168 (32.74%), Postives = 95/168 (56.55%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + +V + ++P++T + +ID+ M+L+KNP + +++ N++ DIISD + + G LGL PS ++ L E HGSAPD+ K NP A++LS+ ML+ L + + + ++ A+ + G RT DLGGS++TS+ AI Sbjct: 188 LDKANVLASSRLWRKTVEETIKNEFPQLTVKHQLIDSAAMILIKNPTQLNGIIITSNMFEDIISDEASVIPGSLGLLPSASLASLPDTNEAFGLYEPCHGSAPDLP-KGKVNPVAMILSAAMMLKLSLNMAKEGEALETAVKQVLDSG-VRTGDLGGSNSTSEVGDAI 353
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_CANAL (3-isopropylmalate dehydrogenase OS=Candida albicans GN=LEU2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18 Identity = 55/170 (32.35%), Postives = 98/170 (57.65%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 + KAN++ + +V + ++E++P ++ + +ID+ M+L++NP +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ N NP A +LS+ +MLR L+ + + ++ A+ + G RTADL G+S+T++ AI + Sbjct: 196 LDKANVLASSRLWRKTVDKVISEEFPALSVQHQLIDSAAMILIQNPTKLSGIIITSNMFGDIISDEASVIPGSLGLLPSASLASLPDTNTAFGLYEPCHGSAPDLPA-NKVNPIATILSAASMLRLALDCVKETEALEEAVKQVLDSG-IRTADLRGTSSTTEVGDAIAE 363
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_KLUMA (3-isopropylmalate dehydrogenase OS=Kluyveromyces marxianus GN=LEU2 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 55/168 (32.74%), Postives = 96/168 (57.14%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + +V + ++P++T + +ID+ M+LVK+P + +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ N NP A +LS+ ML+ L+L ++ ++ A+ + G RT DLGGS++T++ A+ Sbjct: 185 LDKANVLASSRLWRKTVEETIKNEFPQLTVQHQLIDSAAMILVKSPTKLNGIVITNNMFGDIISDEASVIPGSLGLLPSASLASLPDTNKAFGLYEPCHGSAPDLPA-NKVNPIATILSAAMMLKLSLDLVEEGRAVEEAVRKVLDSG-IRTGDLGGSNSTTEVGDAV 350
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_KLULA (3-isopropylmalate dehydrogenase OS=Kluyveromyces lactis GN=LEU2 PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 57/168 (33.93%), Postives = 97/168 (57.74%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + +V + ++P++T + +ID+ M+LVK+P + V++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ N NP A +LS+ ML+ L+L ++ ++ A+ + + G RT DLGGS++T++ AI Sbjct: 188 LDKANVLASSRLWRKTVEETIKTEFPQLTVQHQLIDSAAMILVKSPTKLNGVVITNNMFGDIISDEASVIPGSLGLLPSASLASLPDTNKAFGLYEPCHGSAPDLPA-NKVNPIATILSAAMMLKLSLDLVEEGRALEEAVRNVLDAG-VRTGDLGGSNSTTEVGDAI 353
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BACFR (3-isopropylmalate dehydrogenase OS=Bacteroides fragilis GN=leuB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 47/148 (31.76%), Postives = 87/148 (58.78%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN++ + L+ + +E+A +YPE+T + + +DN M +++ P FDV+V N +GDI++D + + G +GL PS + GE + E +HGS P G N+ANP A +LS + + + + I+ A+ +++ + RT ++ Sbjct: 185 VDKANVLASSR-LWRQIAQEMAPQYPEVTTDYMFVDNAAMKMIQEPKFFDVMVTENTFGDILTDEGSVISGSMGLLPSASTGE-STPVFEPIHGSWPQAKGLNIANPLAQILSVAMLFEYFDCKAEGALIRKAVDASL-DANVRTPEI 329
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BACFN (3-isopropylmalate dehydrogenase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=leuB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 47/148 (31.76%), Postives = 87/148 (58.78%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADL 728 + KAN++ + L+ + +E+A +YPE+T + + +DN M +++ P FDV+V N +GDI++D + + G +GL PS + GE + E +HGS P G N+ANP A +LS + + + + I+ A+ +++ + RT ++ Sbjct: 185 VDKANVLASSR-LWRQIAQEMAPQYPEVTTDYMFVDNAAMKMIQEPKFFDVMVTENTFGDILTDEGSVISGSMGLLPSASTGE-STPVFEPIHGSWPQAKGLNIANPLAQILSVAMLFEYFDCKAEGALIRKAVDASL-DANVRTPEI 329
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_ASHGO (3-isopropylmalate dehydrogenase OS=Ashbya gossypii GN=LEU2 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/169 (36.69%), Postives = 95/169 (56.21%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNI-----GEGGIALAEAVHGSAPDI-AGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + +V ++P + + +ID+ M+LVKNP AF+ V+V N++GDIISD + + G LGL PS ++ + L E HGSAPD+ AGK ANP +LS+ ML+ L + + ++ A+ + G RT DL GSS+TS+ AI Sbjct: 190 LDKANVLASSRLWRKTVEETFQSEFPNVQLQHQLIDSAAMILVKNPRAFNGVVVTSNMFGDIISDEASVIPGSLGLLPSASLASLPDSKSAFGLYEPCHGSAPDLPAGK--ANPIGCILSAAMMLKLSLNMVAAGEAVEQAVQEVLDSG-VRTGDLLGSSSTSEVGDAI 355
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_CALNO (Isocitrate dehydrogenase [NADP] OS=Caldococcus noboribetus GN=icd PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 64/192 (33.33%), Postives = 96/192 (50.00%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVC---------------REVAEKY----PE--ITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADL----GGSS--TTSDFTKAICDHL 728 +HK NIM+ T+G F EV KY PE I + + DN ++ P ++V+V PNL GD ISD L+GG+G+ ++G+ GIA+AE VHGSAP AGKN+ NPTA +LS + +L + + + K T DL GG + +T+++T + D++ Sbjct: 228 MHKGNIMKYTEGAFRQWAYDLILSEFRDYVVTEEEVNTKYGGKAPEGKIIVNDRIADNMLQQIITRPGEYNVIVTPNLNGDYISDEANALVGGIGMAAGLDMGD-GIAVAEPVHGSAPKYAGKNVINPTAEILSGMYLLSDFVGWPEVKLLVEYAVKQAIAHKQVTYDLAREMGGVTPISTTEYTDVLVDYI 418
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_ECOLI (Isocitrate dehydrogenase [NADP] OS=Escherichia coli (strain K12) GN=icd PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 55/150 (36.67%), Postives = 80/150 (53.33%), Query Frame = -2 Query: 339 IHKANIMQKTDGLF*SVCREVAE----------------KYP----EITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRI 728 +HK NIM+ T+G F ++A K P EI ++V+ D ++ PA +DV+ NL GD ISD A +GG+G+ P NIG+ AL EA HG+AP AG++ NP +++LS+ MLRH+ + AD I Sbjct: 228 VHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGD-ECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLI 376
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_PICST (3-isopropylmalate dehydrogenase OS=Pichia stipitis GN=LEU2 PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17 Identity = 55/168 (32.74%), Postives = 98/168 (58.33%), Query Frame = -2 Query: 246 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFD-VLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG-----EGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 728 + KAN++ + +V + + E++P++T + +ID+ M+LV++P + +++ N++GDIISD + + G LGL PS ++ L E HGSAPD+ +N NP A +LS MLR L+ +A+ ++ A+ + G RTADL G+++T + +A+ Sbjct: 196 LDKANVLASSRLWRKTVDKVMKEEFPQLTIQHQLIDSAAMILVQSPTKLNGIVITSNMFGDIISDEASVIPGSLGLLPSASLASLPDTNSAFGLYEPCHGSAPDLP-ENKVNPIATILSVAMMLRLSLDSLKEAEALEEAVRQVLDSG-VRTADLRGTNSTKEVGEAV 361 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |