CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_RICBR (Isocitrate dehydrogenase [NADP] OS=Rickettsia bellii (strain RML369-C) GN=icd PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29 Identity = 72/148 (48.65%), Postives = 98/148 (66.22%), Query Frame = -2 Query: 285 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADL 728 + K NIM+ +DG+F V E+A++YP+I E +ID L P FDV+V NLYGDIISD+ A + G +GL S NIGE A+ EAVHGSAPDIAG+++ANP+ LL +++ ML H+ D A I+NA TI +G + TAD+ Sbjct: 173 LSKDNIMKFSDGIFHKVFNEIAKEYPQINNEHYIIDIGTARLATKPEIFDVIVTSNLYGDIISDVAAEISGSVGLAGSANIGE-HYAMFEAVHGSAPDIAGQDIANPSGLLNAAIMMLVHIGQGDIATLIENAWKKTIEDGMH-TADI 318
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_VIBF1 (3-isopropylmalate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=leuB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29 Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS---TTSDFTKAICDHL 728 I KAN++Q + L+ V EVA+ YP++T + IDN M L+K+P+ FDV++ N++GDIISD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ MLR+ L + A I+ A+ ++ G+ TADL G TTS I +++ Sbjct: 194 IDKANVLQSSI-LWREVVEEVAKGYPDVTLNHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESNFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEEAAQSIEAAVSKALSAGEL-TADLAGDKPALTTSAMGDKIAEYI 360
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_STAA8 (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=leuB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29 Identity = 71/166 (42.77%), Postives = 99/166 (59.64%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + K N++ + L+ V EV++ YPE+T + +D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I S I G+ TADLGG T+D + + L Sbjct: 183 VDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLFVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYSMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_STAAW (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=leuB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + K N++ + L+ V EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 183 VDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_STAAS (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=leuB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + K N++ + L+ V EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 183 VDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_STAAR (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=leuB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + K N++ + L+ V EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 183 VDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVYENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_STAAN (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=leuB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + K N++ + L+ V EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 183 VDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_STAAM (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=leuB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + K N++ + L+ V EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 183 VDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_STAAB (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=leuB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = -2 Query: 234 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 728 + K N++ + L+ V EV++ YPE+T +++D C M L+ NP FDV+V NL+GDI+SD + + G LGL+PS + G L E +HGSAPDIAGKN+ANP ++LS LR L D AD ++ I + I G+ TADLGG T+D + + L Sbjct: 183 VDKENVLASSK-LWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIENGQ-TTADLGGKLNTTDIFEILSQKL 346
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_ECO57 (3-isopropylmalate dehydrogenase OS=Escherichia coli O157:H7 GN=leuB PE=3 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29 Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = -2 Query: 261 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 728 I KAN++Q + L+ + E+A +YP+I + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 193 IDKANVLQSSI-LWREIVNEIATEYPDIELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 349 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |