CX296791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_SALCH (3-isopropylmalate dehydrogenase OS=Salmonella choleraesuis GN=leuB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29 Identity = 70/159 (44.03%), Postives = 103/159 (64.78%), Query Frame = -2 Query: 261 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 728 I KAN++Q + L+ + +VA+ YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ +D A I+ AI + EG RT DL G ++ ++D Sbjct: 193 IDKANVLQSSI-LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAATAIEQAINRALEEG-VRTGDLARGAAAVSTD 349
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_RICTY (Isocitrate dehydrogenase [NADP] OS=Rickettsia typhi GN=icd PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29 Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = -2 Query: 243 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 728 + K NIM+ +DG+F V E+A++YP+I E +ID L P FD++V NLYGDIISD+ A + G +GL S NIG+ A+ EAVHGSAPDIAGK +ANP+ LL +++ ML H+ D A I+NA TI +G + T D+ ++S K +C Sbjct: 173 LSKDNIMKFSDGIFHRVFNEIAKEYPQIDNEHYIIDIGTAKLATTPEIFDIIVTSNLYGDIISDVAAEISGSVGLAGSANIGQ-HYAMFEAVHGSAPDIAGKGIANPSGLLNAAIMMLVHIGQGDIASLIENAWKKTIEDGVH-TFDIYSEHSSS---KKVC 329
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: IDH_RICPR (Isocitrate dehydrogenase [NADP] OS=Rickettsia prowazekii GN=icd PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.541e-29 Identity = 73/160 (45.62%), Postives = 101/160 (63.12%), Query Frame = -2 Query: 243 KANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 722 K NIM+ +DG+F V E+A++YP+I E +ID L P FD++V NLYGDIISD+ A + G +GL S NIG+ A+ EAVHGSAPDIAGK +ANP+ LL +++ ML H+ D A I+NA TI +G + T D+ ++S K +C Sbjct: 175 KDNIMKFSDGIFHRVFNEIAKEYPQINNEHYIIDIGTAKLATKPEIFDIIVTSNLYGDIISDVAAEISGSVGLAGSANIGQ-HYAMFEAVHGSAPDIAGKGIANPSGLLNAAIMMLVHIGQGDIASLIENAWKKTIEDGVH-TFDIYNEHSSS---KKVC 329
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_PHOLL (3-isopropylmalate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=leuB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28 Identity = 66/152 (43.42%), Postives = 100/152 (65.79%), Query Frame = -2 Query: 276 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGS 728 I KAN++Q + L+ V E+A+ YP++ + IDN M L+K+P+ FDV++ N++GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGK +ANP A +LS+ +LR+ L +D A+ I+ A+ + +G YRT DL G+ Sbjct: 193 IDKANVLQSSV-LWREVVTEIAKAYPDVEINHMYIDNATMQLIKDPSQFDVMLCSNIFGDILSDECAMITGSMGMLPSASLNEKGFGLYEPAGGSAPDIAGKGIANPIAQILSAALLLRYSLGHNDAANAIEQAVNYALEQG-YRTTDLAGN 342
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_BORA1 (3-isopropylmalate dehydrogenase OS=Bordetella avium (strain 197N) GN=leuB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28 Identity = 69/164 (42.07%), Postives = 102/164 (62.20%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 + KAN+++ T + + EVA +YP++ + +DN M LV+NP FDV+V NL+GDI+SD A L G +G+ PS ++ G L E HGSAPDIAG+ +ANP A +LS+ +LR+ L +ADRI+ A+ +A+G RTAD+ + TT T + D Sbjct: 190 VDKANVLE-TSQFWRDIVIEVAREYPDVELSHMYVDNAAMQLVRNPRQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLNASGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNQPAQADRIEAAVRKVLAQG-LRTADIHEAGTTKVSTSQMGD 351
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVU (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 69/151 (45.70%), Postives = 97/151 (64.24%), Query Frame = -2 Query: 279 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGG 728 I KAN++Q + L+ V E+A+ YP++ + IDN M L+K+PA FDV++ N++GDIISD CA + G +G+ PS ++ E L E GSAPDIAGKN+ANP A +LS+ MLR+ L A I+NA+ +A G+ TADL G Sbjct: 194 IDKANVLQSSI-LWREVVEELAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAAQDIENAVSQALAAGEL-TADLAG 342
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_SHISS (3-isopropylmalate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=leuB PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = -2 Query: 261 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 728 I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 193 IDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEG-IRTGDLARGAAAVSTD 349
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_PHOPR (3-isopropylmalate dehydrogenase OS=Photobacterium profundum GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 67/150 (44.67%), Postives = 94/150 (62.67%), Query Frame = -2 Query: 279 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGG 728 I KAN++Q + L+ V EVA+ YPE+T + IDN M L+K+P+ FDV++ N++GDIISD CA + G +G+ PS ++ + + E GSAPDIAGKN+ANP A +LS+ MLR+ +KA R +S E TADL G Sbjct: 193 IDKANVLQSSI-LWREVVEEVAKDYPEVTLNHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNQEKFGMYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLDEEKAARAIEQAVSQALEAGELTADLAG 341
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_METCA (3-isopropylmalate dehydrogenase OS=Methylococcus capsulatus GN=leuB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 67/164 (40.85%), Postives = 102/164 (62.20%), Query Frame = -2 Query: 240 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 728 I KAN+++ T+ L+ V EV + YP++ + +DN M LV+NP FDV++ N++GDI+SD A L G +G+ PS ++ E G + E +HGSAPDIAG+ +ANP A +LS MLR+ + A+RI A+ + + +G +RTAD+ T T A+ D Sbjct: 190 IDKANVLECTE-LWREVVIEVGKDYPDVALSHMYVDNAAMQLVRNPKQFDVMLTDNMFGDILSDCAAMLTGSIGMLPSASLAESGKGMYEPIHGSAPDIAGRGIANPIATILSLAMMLRYSFDDAVSAERIGKAVQTALDQG-FRTADIASEGTVEVGTAAMGD 351
BLAST of CX296791 vs. ExPASy Swiss-Prot
Match: LEU3_ECOLI (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain K12) GN=leuB PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = -2 Query: 261 IHKANIMQKTDGLF*SVCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 728 I KAN++Q + L+ + E+A +YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E GSAPDIAGKN+ANP A +LS +LR+ L+ D A I+ AI + EG RT DL G ++ ++D Sbjct: 193 IDKANVLQSSI-LWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEG-IRTGDLARGAAAVSTD 349 The following BLAST results are available for this feature:
BLAST of CX296791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296791 ID=CX296791; Name=CX296791; organism=Citrus clementina; type=EST; length=729bpback to top |