CX296792

Overview
NameCX296792
Unique NameCX296792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33
Identity = 86/195 (44.10%), Postives = 109/195 (55.90%), Query Frame = 2
Query:   20 DQGS-CGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGT--ENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            DQG  CGSCWAFS+IA+VE + ++       LSEQELV+CD S + GC GGL   A E+ I + G+  E + PY  I   C    KN   V ID    +  ND   + K++   P  V I       +LY  GIFTG+CG  L+H V  VG G   E G  YWI+KNSWG  WGE G++R++R   G    KCGI
Sbjct:  244 DQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKS-SMGCAGGLPITALEY-IHSKGVSFESEVPYTGIVSPCKPSIKNK--VFIDSISILKGND--VVNKSLVISPTVVGI-AVTKELKLYSGGIFTGKCGGELNHAVLLVGEGVDHETGMRYWIIKNSWGEDWGENGFLRLQRTKKG--LDKCGI 429          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32
Identity = 76/195 (38.97%), Postives = 108/195 (55.38%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 604
            DQG CG+CWAF+ + A+E    I    LI L+EQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DYPYKA+   C        V   + Y  V L++E+         P+++A++   +    Y  G+ +      L+H V  VGYG EN   YW +KNSWGS +GE GY+R+ R V       CG+  E
Sbjct:  143 DQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF-VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTD--YYGGVISFCENNGLNHAVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGV-----NSCGMINE 329          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32
Identity = 79/204 (38.73%), Postives = 108/204 (52.94%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYG----TENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QG C SCWAFS   A+EG     TG LI LS Q LVDC     N GC  G    A  ++++NGG+++E  YPY+  DGSC  Y        I  +E VP N++  +    +  P+SVAI+    +F  Y+ GI +   C +  + H +  VGYG      +G  YW+VKNS G+ WG  GY+++ R+        CGIA  A Y
Sbjct:  132 QGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSC-RYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKG----NHCGIATYALY 330          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.289e-31
Identity = 77/195 (39.49%), Postives = 106/195 (54.36%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 604
            DQG CG+CW F+++ A+E    I    LI LSEQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DY YKA    C            + Y  V LN+E+         P+++A++   +    Y  GI +      L+H V  VGYG EN   YWI+KNSWGS +GE GY+R+ R V       CG+  E
Sbjct:  143 DQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDF-VDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTD--YYGGIVSFCENNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGV-----NSCGMINE 329          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.683e-31
Identity = 75/194 (38.66%), Postives = 112/194 (57.73%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGAD--YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            DQ +CG CWAFST+ +VEG           LS QEL+DCD S++ GC GGL++ A+E++    G+ + +D P+      C   +  AK V++  Y       ++ + +++ + P SV +       + Y+SG+FTG CG SL+H V  VG G +      YW+V+NSWG+ WGE GY+R+ER   G  T KCG+
Sbjct:  246 DQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD-SFSNGCQGGLLESAYEYV-RKYGLVSAKDLPFVDKARRCSVPK--AKKVSVPSYH--VFKGKEVMTRSLTSSPCSVYLSVSPELAK-YKSGVFTGECGKSLNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLERTNMG--TDKCGV 430          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.898e-31
Identity = 83/199 (41.71%), Postives = 108/199 (54.27%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESG------IFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            +QG CGSCWAFST   VE      TG L+SLSEQ+LVDCD   ++GCNGGL   A+E II  GG+  E++YPY A +  C   + +   V I+   ++  ++ +       N  +SV +    +  Q Y+ G      IF  +    LDH V  VGYG +E    +WIVKNSWG  WGE GY RM R       G CGI
Sbjct:  122 NQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCH-LKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGM--NALLLQFYQHGISHPWWIFCSK--YLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRG-----DGSCGI 309          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.354e-31
Identity = 73/204 (35.78%), Postives = 110/204 (53.92%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF-TGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QG C +CWAF+   A+E      TG L  LS Q LVDC     N GC GG    AF++++ NGG+++E  YPY+  DG C    KN+K   I  +  +P +++  +       P++  I+    +F+ Y+ GI+    C + ++ HGV  VGYG +    +G  YW++KNSWG  WG  GY+++ ++        CGIA  A Y
Sbjct:  133 QGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSK-AEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKD----KNNHCGIASYAHY 331          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 77/182 (42.31%), Postives = 96/182 (52.75%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGS--LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFT--GRCGTSLDHGVTAVGYGTEN--------GADYWIVKNSWGSS 526
            +QG CG CW+FS   A EG   I  G   L S+SEQ+L+DC  SY N GC GGLM  AFE+II+NGGIDTE  YP+ A    C  Y  +     +  Y +V    E  L   V   P SVAI+    +FQ Y SGI+       T LDHGV AVG+G+ +        G+      N+W  S
Sbjct:  129 NQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKC-KYNPSNIGAELSSYVNVTSGSESDLAAKVTQGPTSVAIDASQPSFQFYSSGIYNEPACSSTQLDHGVLAVGFGSGSSGSQSQSAGSQSQSSNNNWSES 309          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 73/196 (37.24%), Postives = 104/196 (53.06%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDD-YEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 604
            +Q +CG+CWAF+T+A++E    I     I LSEQ+++DCD   + GC+GGL+  AFE +I  G +  E +YPY  ++  C+       VV +   Y  V   +EK      A  P+ +AI+  G+    Y  GI        L+H V  VGYG EN   +W  KN+WG  WGE GY R+ +NV       CG+  E
Sbjct:  133 NQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY-VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIVN--YHHGIIHYCENYGLNHAVLLVGYGVENNVPFWTFKNTWGKDWGEEGYFRVRQNV-----DACGMTNE 320          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.861e-30
Identity = 70/203 (34.48%), Postives = 106/203 (52.22%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF-TGRCGTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QG C SCWAF    A+EG     TG LI LS Q L+DC     N GC  G    AF++++ NGG++ E  YPY+  +G C    KN+    I  +  +P +++  +       P++  +     +F+ Y+ G++   +C + ++H V  VGYG E    +G +YW++KNSWG  WG  GY++    +A      C IA  A Y
Sbjct:  143 QGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSS-AKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMK----IAKDRNNHCAIASLAQY 340          
The following BLAST results are available for this feature:
BLAST of CX296792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CYSP_THEAN6.834e-3344.10Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATV_NPVMC3.392e-3238.97Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATM_MOUSE7.556e-3238.73Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATV_NPVSE1.289e-3139.49Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CYSP_THEPA1.683e-3138.66Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATL_SCHMA4.898e-3141.71Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATR_MOUSE8.354e-3135.78Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CYSP6_DICDI1.425e-3042.31Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CATV_NPVBS1.425e-3037.24Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATQ_RAT1.861e-3034.48Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05802H04SK FerrChloL1 Citrus clementina cDNA clone C05802H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296792 ID=CX296792; Name=CX296792; organism=Citrus clementina; type=EST; length=754bp
GAGCTGTCGCTGAAGTTAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGAC
CGTCCCCTCCATCTCCAACAAGCCTCCTGCTGTGTGTGACAATTATTACT
CTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATGGTACTCTTG
CTTG
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