CX296792

Overview
NameCX296792
Unique NameCX296792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 66/231 (28.57%), Postives = 103/231 (44.59%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVT-GSL-ISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTE--------EDYPYKAIDGSC----------DTY-RKNAKVVTIDDYEDVPLNDEK--------------ALQK-AVANQPVSVAIEGGGMAFQLYESGIFT---GRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            DQ SCGSCWAF  + A+     I + G L ++LS  +L+ C  S   GCNGG    A+ + + +G +           + YP+   +             D Y     +   + DY D   +++K              A+QK  + + P+ +A E     F  Y+ G++    G+ G    H V  +G+G ++G  YW V NSW + WGE G+ R+ R V      +CGI
Sbjct:  126 DQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGDPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFE-VYEDFLNYDGGVYVHTGGKLGGG--HAVKLIGWGIDDGIPYWTVANSWNTDWGEDGFFRILRGV-----DECGI 348          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: TINAL_MOUSE (Tubulointerstitial nephritis antigen-like OS=Mus musculus GN=Tinagl1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 72/234 (30.77%), Postives = 106/234 (45.30%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIA-AVEGINKIVTGSLIS-LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGS-------CDTYRK--------------NAKVVTIDDYEDVPL----NDEKALQK-AVANQPVSVAIEGGGMAFQLYESGIFT------GRCGTSLDHGVTAV---GYGTENGAD-----YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            DQG+C   WAFST A A + ++    G +   LS Q L+ CDT + +GC GG +D A+ F +   G+ ++  YP+   + +       C  + +              N +V + D Y+  P     +DEK + K  + N PV   +E     F LY+ GI++      GR      HG  +V   G+G E   D     YW   NSWG  WGE G+ R+ R      T +C I
Sbjct:  221 DQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHHQQGCRGGRLDGAWWF-LRRRGVVSDNCYPFSGREQNEASPTPRCMMHSRAMGRGKRQATSRCPNGQVDSNDIYQVTPAYRLGSDEKEIMKELMENGPVQALME-VHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRG-----TNECDI 447          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 68/209 (32.54%), Postives = 97/209 (46.41%), Query Frame = 2
Query:   32 CGSCWAF-STIAAVEGINKIVTGSL--ISLSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCG 592
            CGSCWA  ST A  + IN    G+   I LS Q ++DC  + +  C GG    + +YA +      GI  E    Y+A D  CD + +           TI +Y    + D       EK + +  AN P+S  I    M    Y  GI+      + ++H ++  G+G  N G +YWIV+NSWG  WGE G++R+   V  T  G  G
Sbjct:   91 CGSCWAHGSTSAMADRINIKRKGAWPSILLSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATEMMSN-YTGGIYAEHQDQAVINHIISVAGWGVSNDGIEYWIVRNSWGEPWGEKGWMRI---VTSTYKGGTG 288          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 62/214 (28.97%), Postives = 92/214 (42.99%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKA-----IDGSCDTY----------RKNAKVVTIDDYEDVPL-----NDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLD-HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIA 598
            +Q  CGSCWAF    +      I     + LS  ++V CD + N GC GG    A+ ++   G + +EE  PY           C  +          + N+ ++   D   +       +DE  +Q+ V N PV          F  Y+SG++    G  L  H V  VG+GT NG DY+   N W +SWG+ G   ++R       G CGI+
Sbjct:  100 NQARCGSCWAFGATESATDRLCIHNNENVQLSFMDMVTCDETDN-GCEGGDAFSAWNWLRKQGAV-SEECLPYTIPTCPPAQQPCLNFVNTPSCTKECQSNSSLIYSQDKHKMAKIYSFDSDEAIMQEIVTNGPVEACFTVFE-DFLAYKSGVYVHTTGKDLGGHCVKLVGFGTLNGVDYYAANNQWTTSWGDNGTFLIKR-------GDCGIS 303          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 68/209 (32.54%), Postives = 97/209 (46.41%), Query Frame = 2
Query:   32 CGSCWAF-STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCG 592
            CGSCWA  ST A  + IN    G+  S  LS Q ++DC  + +  C GG    + +YA +      GI  E    Y+A D  CD + +           TI +Y    + D       EK + +  AN P+S  I         Y  GI+T     ++ +H ++  G+G  N G +YWIV+NSWG  WGE G++R+   V  T  G  G
Sbjct:   91 CGSCWAHGSTSALADRINIKRKGAWPSTLLSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERMSN-YTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI---VTSTYKGGTG 288          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 61/192 (31.77%), Postives = 90/192 (46.88%), Query Frame = 2
Query:   32 CGSCWAF-STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR--------------KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM 553
            CGSCWA  ST A  + IN    G+  S  LS Q ++DC  + +  C GG     +E+     GI  E    Y+A D  CD +               KN  +  + DY  +    EK + +   N P+S  I         Y  GI++     + ++H V+  G+G  +G +YWIV+NSWG  WGE G++R+
Sbjct:   90 CGSCWAHGSTSAMADRINIKRKGAWPSTLLSVQHVIDCGDAGS--CEGGNDLPVWEYA-HRHGIPDETCNNYQAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLS-GREKMMAEIYTNGPISCGIMATEKMSN-YTGGIYSEYNDQAFINHIVSVAGWGVSDGMEYWIVRNSWGEPWGEHGWMRI 276          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: TINAG_BOVIN (Tubulointerstitial nephritis antigen OS=Bos taurus GN=TINAG PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 59/221 (26.70%), Postives = 92/221 (41.63%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGS--LISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY----KAIDGSC-------------------DTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLD---------HGVTAVGYGTENGAD-----YWIVKNSWGSSWGEAGYIRMERNV 565
            DQ +C + WAFST +       I +      +LS Q L+ C      GCN G +D A+ ++   G + +   YP      A +  C                   ++  K+ ++        V  N+ + +++ + N PV   ++     F  Y++GI+     T+ D         H V   G+GT  GA      +WI  NSWG SWGE GY R+ R V
Sbjct:  236 DQKNCAASWAFSTASVAADRIAIQSQGRYTANLSPQNLISCCAKKRHGCNSGSVDRAWWYLRKRGLV-SHACYPLFKDQNATNNGCAMASRSDGRGKRHATTPCPNSIEKSNRIYQCSPPYRVSSNETEIMREIMQNGPVQAIMQVHEDFFN-YKTGIYRHITSTNEDSEKYRKFRTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGV 454          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: TINAG_HUMAN (Tubulointerstitial nephritis antigen OS=Homo sapiens GN=TINAG PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 58/221 (26.24%), Postives = 91/221 (41.18%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGS--LISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY----KAIDGSC-------------------DTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLD---------HGVTAVGYGTENGAD-----YWIVKNSWGSSWGEAGYIRMERNV 565
            DQ +C + WAFST +       I +      +LS Q L+ C      GCN G +D A+ ++   G + +   YP      A +  C                   +   K+ ++        V  N+ + +++ + N PV   ++     F  Y++GI+     T+ +         H V   G+GT  GA      +WI  NSWG SWGE GY R+ R V
Sbjct:  236 DQKNCAASWAFSTASVAADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSGSIDRAWWYLRKRGLV-SHACYPLFKDQNATNNGCAMASRSDGRGKRHATKPCPNNVEKSNRIYQCSPPYRVSSNETEIMKEIMQNGPVQAIMQVREDFFH-YKTGIYRHVTSTNKESEKYRKLQTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGV 454          
The following BLAST results are available for this feature:
BLAST of CX296792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CPR6_CAEEL6.426e-1528.57Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
TINAL_MOUSE8.393e-1530.77Tubulointerstitial nephritis antigen-like OS=Mus m... [more]
CATZ_MOUSE8.393e-1532.54Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]
CTSB_DICDI1.096e-1428.97Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]
CATZ_RAT1.870e-1432.54Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
CATZ_BOVIN3.189e-1431.77Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2[more]
TINAG_BOVIN1.026e-1226.70Tubulointerstitial nephritis antigen OS=Bos taurus... [more]
TINAG_HUMAN2.985e-1226.24Tubulointerstitial nephritis antigen OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionC05802H04SK FerrChloL1 Citrus clementina cDNA clone C05802H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296792 ID=CX296792; Name=CX296792; organism=Citrus clementina; type=EST; length=754bp
GAGCTGTCGCTGAAGTTAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGAC
CGTCCCCTCCATCTCCAACAAGCCTCCTGCTGTGTGTGACAATTATTACT
CTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATGGTACTCTTG
CTTG
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