CX296792

Overview
NameCX296792
Unique NameCX296792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.836e-68
Identity = 120/199 (60.30%), Postives = 154/199 (77.39%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD-TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI++NGG+ T+ DYPYKA++G C+   +++ K V ID YE++P NDE AL KAVA+QPV+  ++     FQLYESG+F G CGT+L+HGV  VGYGTENG DYWIVKNS G +WGEAGY++M RN+A    G CGIAM ASY
Sbjct:  161 DQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANP-RGLCGIAMRASY 357          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.010e-68
Identity = 126/198 (63.64%), Postives = 152/198 (76.77%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCWAF  IAAVEGIN+IVTG LISLSEQ+LVDC T  N GC GG    AF++II+NGGI++EE YPY   +G+CDT ++NA VV+ID Y +VP NDEK+LQKAVANQPVSV ++  G  FQLY +GIFTG C  S +H  T  G  TEN  DYW VKNSWG +WGE+GYIR+ERN+A + +GKCGIA+  SY
Sbjct:   20 NQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCSTR-NHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTNGTCDT-KENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTGSCNISANHYRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAES-SGKCGIAISPSY 214          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.247e-67
Identity = 124/198 (62.63%), Postives = 151/198 (76.26%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +Q  CGSCWAFS +AAVE INKI TG LISLSEQELVDCDT+ + GCNGG M+ AF++II NGGIDT+++YPY A+ GSC  YR   +VV+I+ ++ V  N+E ALQ AVA+QPVSV +E  G  FQ Y SGIFTG CGT+ +HGV  VGYGT++G +YWIV+NSWG +WG  GYI MERNVA +  G CGIA   SY
Sbjct:   18 NQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASS-AGLCGIAQLPSY 211          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.017e-58
Identity = 116/193 (60.10%), Postives = 140/193 (72.54%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIA 598
            +QGSCGSCWAFST++ VE IN+I TG+LISLSEQELVDCD   N GC GG   +A+++II+NGGIDT+ +YPYKA+ G C      +KVV+ID Y  VP  +E AL++AVA QP +VAI+     FQ Y SGIF+G CGT L+HGVT VGY     A+YWIV+NSWG  WGE GYIRM R V G   G CGIA
Sbjct:   18 NQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPCQAA---SKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGVTIVGY----QANYWIVRNSWGRYWGEKGYIRMLR-VGG--CGLCGIA 199          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 5.745e-56
Identity = 106/198 (53.54%), Postives = 137/198 (69.19%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG+CGSCWAFSTIA VEGINKIVTG+L+ LSEQELVDCD  ++ GC GG    + +++ +NG + T + YPY+A    C    K    V I  Y+ VP N E +   A+ANQP+SV +E GG  FQLY+SG+F G CGT LDH VTAVGYGT +G +Y I+KNSWG +WGE GY+R++R  +G   G CG+   + Y
Sbjct:  152 NQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYVANNG-VHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQ-SGNSQGTCGVYKSSYY 346          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.152e-54
Identity = 112/203 (55.17%), Postives = 137/203 (67.49%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFT-GRCG-TSLDHGVTAVGYGT-ENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY+ ID SC  + K     T   + D+P  DE+ ++KAVA   PVSVAI+    +FQLY  G++    C   +LDHGV  VGYGT E+G DYW+VKNSWG++WGE GYI+M RN       +CGIA  +SY
Sbjct:  139 DQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCH-FNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARN----QNNQCGIATASSY 336          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 5.945e-53
Identity = 109/203 (53.69%), Postives = 138/203 (67.98%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFT-GRC-GTSLDHGVTAVGYGT-ENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCWAFS+  A+EG +   +G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY+AID SC  + K     T   + D+P  DEK + +AVA   PVSVAI+    +FQ Y  G++   +C   +LDHGV  VG+GT E+G DYW+VKNSWG++WG+ G+I+M RN       +CGIA  +SY
Sbjct:  171 DQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCH-FNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN----KENQCGIASASSY 368          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.324e-52
Identity = 102/196 (52.04%), Postives = 137/196 (69.90%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAM 601
            +Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A++FII N G+ TEE+YPY A  G+C+     N+  +T   Y  V  NDE+++  AV+NQP++  I+     FQ Y  G+F+G CGTSL+H +T +GYG + +G  YWIV+NSWGSSWGE GY+RM R V+ + +G CGIAM
Sbjct:  140 NQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNANSFPNSAYIT--GYSYVRRNDERSMMYAVSNQPIAALID-ASENFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSS-SGVCGIAM 329          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.573e-52
Identity = 101/192 (52.60%), Postives = 125/192 (65.10%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            +Q  CGSCWAFST+A VEGINKI TG LISLSEQEL+DCD   + GC GG    + +++ DNGG+ TE++YPY+   G C    K    V I  Y+ VP NDE +L + + NQPVSV  E  G AFQLY+ GIF G CG   DH VTA+GYG     D    KNSWG +WGE GYI+++R  +G   G CG+
Sbjct:   18 NQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR-SHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAFQLYKGGIFNGPCGYKNDHAVTAIGYGKAQLLD----KNSWGPNWGEKGYIKIKR-ASGKSEGTCGV 203          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.573e-52
Identity = 104/201 (51.74%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID+E  YPYKA++G C  Y    +  T   Y ++P   E AL++AVAN+ PVSVAI+    +F LY SG++    C  +++HGV  VGYG  NG DYW+VKNSWG ++G+ GYIRM RN        CGIA   SY
Sbjct:  133 QGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKC-RYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSG----NHCGIASYPSY 328          
The following BLAST results are available for this feature:
BLAST of CX296792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CPR4_ARATH3.836e-6860.30Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPGP1_ZINOF5.010e-6863.64Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
ERVB_TABDI3.247e-6762.63Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
ERVC_TABDI8.017e-5860.10Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
PAPA2_CARPA5.745e-5653.54Chymopapain OS=Carica papaya PE=1 SV=2[more]
CATL_SARPE3.152e-5455.17Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATL_DROME5.945e-5353.69Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
BROM1_ANACO1.324e-5252.04Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
MEX2_JACME6.573e-5252.60Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATS_CANFA6.573e-5251.74Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05802H04SK FerrChloL1 Citrus clementina cDNA clone C05802H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296792 ID=CX296792; Name=CX296792; organism=Citrus clementina; type=EST; length=754bp
GAGCTGTCGCTGAAGTTAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGAC
CGTCCCCTCCATCTCCAACAAGCCTCCTGCTGTGTGTGACAATTATTACT
CTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATGGTACTCTTG
CTTG
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