CX296792

Overview
NameCX296792
Unique NameCX296792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 8.585e-52
Identity = 102/197 (51.78%), Postives = 124/197 (62.94%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QGSCGSCWAFS +A VEGINKI TG L+ LSEQELVDC+   + GC GG   YA E++  NG I     YPYKA  G+C   +    +V       V  N+E  L  A+A QPVSV +E  G  FQLY+ GIF G CGT +DH VTAVGYG   G  Y ++KNSWG++WGE GYIR++R   G   G CG+   + Y
Sbjct:  151 QGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALEYVAKNG-IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKR-APGNSPGVCGLYKSSYY 344          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.121e-51
Identity = 99/192 (51.56%), Postives = 130/192 (67.71%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            +Q  CGSCWAFST+A +EGINKI+TG LISLSEQEL+DC+   + GC+GG    + ++++DNG + TE +YPY+   G C    K    V I  Y+ VP NDE +L +A+ANQPVSV  +  G  FQ Y+ GI+ G CGT+ DH VTAVGY    G  Y ++KNSWG +WGE GYIR++R  +G   G CG+
Sbjct:   18 NQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR-SHGCDGGYQTPSLQYVVDNG-VHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGY----GKTYLLLKNSWGPNWGEKGYIRIKR-ASGRSKGTCGV 202          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.913e-51
Identity = 107/202 (52.97%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCWAFST  A+EG +    G L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGGID+EE YPY A D     Y+          + D+P   E+AL KAVA+  PVSVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E G  YWIVKNSWG  WG+ GYI M ++        CGIA  ASY
Sbjct:   18 DQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKD----RKNHCGIATAASY 215          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.498e-51
Identity = 97/195 (49.74%), Postives = 136/195 (69.74%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT-YRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAM 601
            +QG CG CWAF+ IA VEGI KI  G+L+ LSEQE++DC  SY  GC GG ++ A++FII N G+ T+E+YPY+A  G+C+  Y  N+  +T   Y  V  NDE  +  AV+NQP++  I+  G  FQ Y+ G+++G CG SL+H +T +GYG ++   YWIV+NSWGSSWG+ GY+R+ R+V+ +  G CGIAM
Sbjct:   19 NQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDCAVSY--GCKGGWVNRAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAYIT--GYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRDS---YWIVRNSWGSSWGQGGYVRIRRDVSHS-GGVCGIAM 205          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 7.268e-51
Identity = 103/201 (51.24%), Postives = 134/201 (66.67%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++IIDN GID+E  YPYKA+DG C    KN +  T   Y ++P   E+AL++AVAN+ PVSV I+    +F LY++G++    C  +++HGV  VGYG  +G DYW+VKNSWG  +G+ GYIRM RN        CGIA   SY
Sbjct:  133 QGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKN-RAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSG----NHCGIANYPSY 328          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.240e-50
Identity = 107/202 (52.97%), Postives = 132/202 (65.35%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQ  CGSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M  AF++I DNGGIDTE  YPY+A D SC     +   +     E    + E+ALQ+AV+   P+SVAI+    +FQ Y SG++  + C  T LDHGV AVGYGTE+  DYW+VKNSWGSSWG+AGYI+M RN        CGIA E SY
Sbjct:  123 DQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVE--VQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRN----RDNNCGIASEPSY 318          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.240e-50
Identity = 104/202 (51.49%), Postives = 133/202 (65.84%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF++I  N GIDTE  YPY+A DGSC  +  N+   T   + ++    E  LQ+AV +  P+SV I+    +FQ Y SG++    C  S LDH V AVGYG+E G D+W+VKNSW +SWG+AGYI+M RN        CGIA  ASY
Sbjct:  124 DQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSC-RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRN----RNNNCGIATVASY 320          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.762e-50
Identity = 102/202 (50.50%), Postives = 135/202 (66.83%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK-AIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++EE YPY+  ++  C  +++ +    I  Y+++   DE  LQ A+   PVSVAI+    +FQLY +G++     +S  LDHGV AVG GT+NG DY+IVKNSWG SWG  GYI M RN        CGI+  ASY
Sbjct:  138 DQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDEC-KFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARN----KDNNCGISTMASY 334          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.711e-50
Identity = 107/203 (52.71%), Postives = 132/203 (65.02%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCWAFS +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II N GIDTE  YPYKAID +C  Y       T+  Y +    DE ALQ AV N+ PVSV I+ G  +F  Y  G+ +   C +   +H VTAVGYGT+ NG DYWIVKNSWG+ WGE+GYI+M RN        C IA  + Y
Sbjct:  123 DQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNC-RYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARN----RDNNCAIATYSVY 320          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.049e-49
Identity = 100/200 (50.00%), Postives = 127/200 (63.50%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC   Y N+GCNGG M  AF++IIDN GID+E  YPYKA D  C  Y    +  T   Y ++P   E  L++AVAN+ PV V ++    +F LY SG++    C   ++HGV  +GYG  NG +YW+VKNSWGS++GE GYIRM RN        CGIA   SY
Sbjct:  133 QGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQ-YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKG----NHCGIASYPSY 327          
The following BLAST results are available for this feature:
BLAST of CX296792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
PAPA3_CARPA8.585e-5251.78Caricain OS=Carica papaya PE=1 SV=2[more]
MEX1_JACME1.121e-5151.56Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATL1_CHICK1.913e-5152.97Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
MDO1_PSEMR2.498e-5149.74Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CATS_BOVIN7.268e-5151.24Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CYSP3_HOMAM1.240e-5052.97Digestive cysteine proteinase 3 OS=Homarus america... [more]
CYSP2_HOMAM1.240e-5051.49Digestive cysteine proteinase 2 OS=Homarus america... [more]
CYSP3_DICDI2.762e-5050.50Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CRUST_PANBO4.711e-5052.71Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATS_SAIBB1.049e-4950.00Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05802H04SK FerrChloL1 Citrus clementina cDNA clone C05802H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296792 ID=CX296792; Name=CX296792; organism=Citrus clementina; type=EST; length=754bp
GAGCTGTCGCTGAAGTTAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGAC
CGTCCCCTCCATCTCCAACAAGCCTCCTGCTGTGTGTGACAATTATTACT
CTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATGGTACTCTTG
CTTG
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