CX296792

Overview
NameCX296792
Unique NameCX296792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 2.858e-47
Identity = 104/206 (50.49%), Postives = 128/206 (62.14%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNGG+D+EE YPY A D +   Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  131 NQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 188.348 bits (477), Expect = 3.733e-47
Identity = 96/197 (48.73%), Postives = 120/197 (60.91%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  NG I     YPY A   +C   +     V  +    V  N+E +L  A+A+QPVSV +E  G  FQ Y+ GIF G CGT +DH VTAVGYG   G  Y ++KNSWG  WGE GYIR+ R  +G   G CG+   + Y
Sbjct:  151 QGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ-SYGCNRGYQSTSLQYVAQNG-IHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKSGGKGYILIKNSWGPGWGENGYIRI-RRASGNSPGVCGVYRSSYY 344          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.315e-47
Identity = 102/206 (49.51%), Postives = 128/206 (62.14%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGG+DTEE YPY   + +  TY+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N + +WIVKNSWG  WG  GY++M ++        CGI+  ASY
Sbjct:  131 NQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGISTAASY 331          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.086e-46
Identity = 103/205 (50.24%), Postives = 126/205 (61.46%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGY---GTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  NEGCNGGLMD AF ++ DNGG+D+EE YPY   D     Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI F   C +  LDHGV  VGY   GT++   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  131 NQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 330          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.419e-46
Identity = 102/203 (50.25%), Postives = 129/203 (63.55%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGG-MAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            QGSCGSCWAFS   A+EG  K+ TG L+SLS Q LVDC T     N+GC GG M  AF++IID   ID+E  YPYKA+D  C  Y    +  T   Y ++P  DE+AL++AVA + PVSV I+     +F LY+SG++    C  +++HGV  VGYGT +G DYW+VKNSWG  +G+ GYIRM RN        CGIA   SY
Sbjct:  131 QGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDTS-IDSEASYPYKAMDEKC-LYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARN----NKNHCGIASYCSY 327          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.160e-46
Identity = 103/206 (50.00%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNG +D+EE YPY A D +   Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  131 NQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.127e-46
Identity = 103/203 (50.74%), Postives = 128/203 (63.05%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCWAFS   A+EG     TG L+SLSEQ LVD      N+GCNGGLMD AF++I +NGG+D+EE YPY+A D SC+ Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E     +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:   18 NQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCN-YKPEYSAAKDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKD----QNNHCGIATAASY 214          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 9.194e-46
Identity = 99/204 (48.53%), Postives = 128/204 (62.75%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCW FST  ++E      TG  +SLSEQ+LVDC T+YN  GC+GGL   AFE+I  NGG+DTEE YPY  ++G C    +N  V  +D   ++ L  E  L+ AV   +PVSVA +     F++Y+SG++T   CGTS   ++H V AVGYG ENG  YW++KNSWG+ WG+ GY +ME          CGIA  ASY
Sbjct:  162 DQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSV-NITLGAEDELKNAVGLVRPVSVAFQVIN-GFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG-----KNMCGIATCASY 358          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.675e-45
Identity = 103/207 (49.76%), Postives = 127/207 (61.35%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVA---IEGGGMAFQLYESGIFTG-RCGTSLD---HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +Q  CGSCW FST  A+E      TG  ISLSEQ+LVDC   +N  GCNGGL   AFE+I  NGGIDTEE YPYK ++G C    +NA V  +D   ++ LN E  L+ AV   +PVSVA   I+G    F+ Y+SG++T   CGT+ D   H V AVGYG ENG  YW++KNSWG+ WG+ GY +ME          C IA  ASY
Sbjct:  161 NQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSV-NITLNAEDELKNAVGLVRPVSVAFQVIDG----FRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG-----KNMCAIATCASY 357          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.494e-45
Identity = 98/204 (48.04%), Postives = 128/204 (62.75%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCW FST  A+E      TG  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTEE YPY+ ++G C    +N  V  +D   ++ L  E  L+ AV   +PVSVA E     F+LY+SG++T   CGT+   ++H V AVGYG E+G  YW++KNSWG+ WG+ GY +ME          CG+A  ASY
Sbjct:  160 NQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSV-NITLGAEDELKDAVGLVRPVSVAFEVI-TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMG-----KNMCGVATCASY 356          
The following BLAST results are available for this feature:
BLAST of CX296792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATL1_BOVIN2.858e-4750.49Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
PAPA4_CARPA3.733e-4748.73Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATL1_PIG8.315e-4749.51Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CANFA1.086e-4650.24Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATS_RAT2.419e-4650.25Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATL2_BOVIN3.160e-4650.00Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_SHEEP4.127e-4650.74Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
ORYC_ORYSJ9.194e-4648.53Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
ALEU_HORVU2.675e-4549.76Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP2_MAIZE3.494e-4548.04Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC05802H04SK FerrChloL1 Citrus clementina cDNA clone C05802H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296792 ID=CX296792; Name=CX296792; organism=Citrus clementina; type=EST; length=754bp
GAGCTGTCGCTGAAGTTAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGAC
CGTCCCCTCCATCTCCAACAAGCCTCCTGCTGTGTGTGACAATTATTACT
CTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATGGTACTCTTG
CTTG
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