CX296792

Overview
NameCX296792
Unique NameCX296792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.163e-40
Identity = 92/204 (45.10%), Postives = 121/204 (59.31%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QGSCGSCW FST  A+E    I TG L  L+EQ+LVDC  ++N  GC GGL   AFE+I  N GI  E+ YPY+  DG C  Y+ +  +  + D  ++ LNDE+A+ +AVA + PVS A E     F +Y  GI++     +    ++H V AVGYG E G  YWIVKNSWG +WG  GY  +ER         CG+A  AS+
Sbjct:  134 NQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCK-YQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTA-DFMMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERG-----KNMCGLAACASF 330          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.519e-40
Identity = 94/204 (46.08%), Postives = 120/204 (58.82%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTGR-CGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE+I  NGG+DTEE YPY   DG C    KN  V  + D  ++ L  E  L+ AV   +PVSVA E     F+ Y+ G+FT   CG +   ++H V AVGYG E+   YW++KNSWG  WG+ GY +ME          CG+A  +SY
Sbjct:  158 EQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGV-QVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVH-EFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMG-----KNMCGVATCSSY 354          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.984e-40
Identity = 93/201 (46.27%), Postives = 121/201 (60.20%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAV-ANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL--DHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEAS 610
            DQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A++++    G++TE  YPY A++G C  Y K   V  +  Y  V    E  L+  V A +P +VA++     F +Y SGI+  +  + L  +H V AVGYGT+ G DYWIVKNSWG+ WGE GYIRM RN        CGIA  AS
Sbjct:  125 DQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYL-KQFGLETESSYPYTAVEGQC-RYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVES-DFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRG----NMCGIASLAS 318          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.419e-40
Identity = 93/204 (45.59%), Postives = 123/204 (60.29%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLD---HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++N  GC GGL   AFE+I+ N GI  E+ YPY   D SC  +     V  + +  ++ LNDE A+ +AVA   PVS A E     F +Y+SG+++ + C  + D   H V AVGYG +NG  YWIVKNSWGS WGE GY  +ER         CG+A  ASY
Sbjct:  132 NQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSC-RFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTE-DFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERG-----KNMCGLAACASY 328          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 163.31 bits (412), Expect = 1.286e-39
Identity = 89/204 (43.63%), Postives = 121/204 (59.31%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG+CGSCW FST  A+E    I TG ++SL+EQ+LVDC   +N  GC GGL   AFE+I+ N GI  E+ YPY+  DG C  ++    +  + D  ++ + DE+A+ +AVA   PVS A E     F +Y +GI++     +    ++H V AVGYG +NG  YWIVKNSWG  WG  GY  +ER         CG+A  ASY
Sbjct:  134 NQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCK-FQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVT-QDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERG-----KNMCGLAACASY 330          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.679e-39
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG+CGSCW FST  A+E    I +G +++L+EQ+LVDC  ++N  GC GGL   AFE+I+ N GI  E+ YPY   +G C  +     V  + +  ++ LNDE A+ +AVA   PVS A E     F +Y+SG+++     +    ++H V AVGYG +NG  YWIVKNSWGS+WG  GY  +ER         CG+A  ASY
Sbjct:  132 NQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCK-FNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTE-DFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERG-----KNMCGLAACASY 328          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.193e-39
Identity = 87/202 (43.07%), Postives = 118/202 (58.42%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLDHGVTAVGYGTENGA-------DYWIVKNSWGSSWGEAGYIRM--ERNVAG 571
            +QGSCGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  EEDYPY   DG      K+  V ++ ++  + +++E+     V N P++VAI  G M  Q Y  G+     C   L+HGV  VGYG    A        YWI+KNSWG +WGE G+ ++   RN+ G
Sbjct:  152 NQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYM--QTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICG 351          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39
Identity = 83/204 (40.69%), Postives = 120/204 (58.82%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS----LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCW F +  ++EG N +  G L+SLSEQ+LVDC   + ++GC GG    AF+++++ G + TE +YPY   +G C         V+I  Y +V    E ALQ A+A   PV++AI+     F+ Y SG++      +    LDH V A+GYGT  G DY++VKNSW ++WG  GY+ M RN        CG++ +A+Y
Sbjct:  326 DQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARND----NNLCGVSSQATY 525          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39
Identity = 89/203 (43.84%), Postives = 122/203 (60.10%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEG-INKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG--RCGTSL-DHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCW F T A +EG +NK + G L S SEQ+LVDCD S N GC GG    + +FI +N G+  E DYPYKA+ G+C   +K   V T+     V    E  LQ  +A N PV+V ++    +FQLY+ G      +C + + +H VTAVGYG+ +   YWI++NSWG+SWG+AGY  + R+        CGI  +++Y
Sbjct:  108 DQGQCGSCWTFCTTAVLEGRVNKDL-GKLYSFSEQQLVDCDASDN-GCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTC---KKVKNVATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARD----SNNMCGIGRDSNY 301          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.089e-38
Identity = 84/202 (41.58%), Postives = 119/202 (58.91%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLDHGVTAVGYGTENGAD-------YWIVKNSWGSSWGEAGYIRM--ERNVAG 571
            +QGSCGSCW+FST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  E+DYPY   DG      ++  V ++ ++  V +N+++     + N P++VAI    M  Q Y  G+     C   L+HGV  VGYG+   +        YWI+KNSWG SWGE G+ ++   RN+ G
Sbjct:  149 NQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYM--QTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICG 348          
The following BLAST results are available for this feature:
BLAST of CX296792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATH_BOVIN1.163e-4045.10Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ALEUL_ARATH1.519e-4046.08Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATLL_FASHE1.984e-4046.27Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATH_MOUSE4.419e-4045.59Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATH_HUMAN1.286e-3943.63Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATH_RAT1.679e-3943.63Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
RD19A_ARATH2.193e-3943.07Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CFAD_DICDI2.865e-3940.69Counting factor associated protein D OS=Dictyostel... [more]
ACP1_ENTHI2.865e-3943.84Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
A494_ARATH1.089e-3841.58Probable cysteine proteinase A494 OS=Arabidopsis t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05802H04SK FerrChloL1 Citrus clementina cDNA clone C05802H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296792 ID=CX296792; Name=CX296792; organism=Citrus clementina; type=EST; length=754bp
GAGCTGTCGCTGAAGTTAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGAC
CGTCCCCTCCATCTCCAACAAGCCTCCTGCTGTGTGTGACAATTATTACT
CTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATGGTACTCTTG
CTTG
back to top