CX296792

Overview
NameCX296792
Unique NameCX296792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38
Identity = 101/210 (48.10%), Postives = 123/210 (58.57%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDD--YEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGAD-----YWIVKN-SWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            DQG CGSCWAFS   A+EG     TG LISL+EQ LVDC     NEGCNGG MD  F ++ +NGG+D+E  YPY   +G   T R N K    +D  + D+P + EK L KAVA   P+SVA     ++FQ Y+ GI F  RC    LDH +  VGY  E GAD     YW+VKN S G +WG  GYI+M ++        CGIA  ASY
Sbjct:   74 DQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPY---EGKVKTCRYNPKYSAANDTGFVDIP-SQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCDPEGLDHAMLLVGYSYE-GADSDNNKYWLVKNSSEGKNWGMDGYIKMAKD----RRNNCGIATAASY 274          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38
Identity = 88/208 (42.31%), Postives = 120/208 (57.69%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQK-AVANQPVSVAIEGGGMAFQLYESGI---FTGRCG-TSLDHGVTAVGYGTENGAD------YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEAS 610
            +QGSCGSCWAFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++ I D GG++ E +YPYKA    C  + +    V +  + D+P  +E A+Q+  +AN P+S+ I    M  Q Y  G+   +   C   +LDHGV  VGYG  +  +      YWIVKNSWG  WGE GY R+ R         CG++  A+
Sbjct:  411 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCH-FNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAM--QFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRG-----DNTCGVSEMAT 609          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.204e-37
Identity = 89/202 (44.06%), Postives = 123/202 (60.89%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFT-GRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG CGSC+AF+T AA+E  +K +TG L+ LS Q +VDC  +  N GC+GG M  AF++     GI  E  YPY   +  C  ++++  VVT + + ++   DE AL+ AVA + PV V I G   +F+ Y+ G+++ G CG   DH V AVGYGT  +  DYWIVKNSWG+ WG+ GY+ M RN        C IA  AS+
Sbjct:  199 NQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLGNNGCSGGYMPTAFQY-ASRYGIAMESRYPYVGTEQRC-RWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP-DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNRG----NMCHIASAASF 393          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37
Identity = 79/183 (43.17%), Postives = 109/183 (59.56%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGG--IDTEEDYPYKAIDGSCDTYRKNAKVV--TIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMER 559
            QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF +I+++ G  + TE  YPY + +G     + N   +   I D+ D+P +++        N P+++A++    +F  Y  GI T      LDHGV  VGY   +   YWI+KNSW + WGE GYIR+E+
Sbjct:  144 QGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAE--SFMDYNGGILTSCTSKQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEK 323          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36
Identity = 82/208 (39.42%), Postives = 117/208 (56.25%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLDHGVTAVGYGTENGA-------DYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            +QGSCGSCW+FS   A+EG + + TG L  LSEQ+ VDCD         S + GCNGGLM  AF ++   GG+++E+DYPY   DG C  + K+  V ++ ++  V +++ +     + + P+++ I    M  Q Y  G+     CG  LDHGV  VGYG    A        YWI+KNSWG +WGE GY ++ R     +  KCG+
Sbjct:  154 NQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKC-KFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYM--QTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICR--GSNVRNKCGV 356          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 85/195 (43.59%), Postives = 112/195 (57.44%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 604
            +QG CGSCWAF+ I  +E    I+  SLI LSEQ+L+DCD   ++GC+GGLM  AF+ II  GG++ E DYPY+ I+ +C        V     Y+    ++ K L+    N P++VAI+   +    Y SGI T      L+H V  VGYG EN   YWI KNSWGS+WGE GY R  RN+       CG+  E
Sbjct:  143 EQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR-VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIID--YRSGIATVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNI-----NACGMLNE 329          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 87/194 (44.85%), Postives = 111/194 (57.22%), Query Frame = 2
Query:   23 QGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 595
            Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AFE II  GGI  E  YPY  +DG C   +   + V +       L  EK L++ +  + PVSVAI+   +    Y+SG+    C     L+HGV  VGYG EN   YW +KNSWGS WGE G+ R++R+V       CGI
Sbjct:  151 QKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTN--YKSGV-AKHCSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDV-----NSCGI 332          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 85/206 (41.26%), Postives = 122/206 (59.22%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRC-GTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 613
            +QG C S WAFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+++ DNGG+ TEE YPY+     C  + +N+    + D+  +P   E+AL KAVA   P+SVA++    +FQ Y SGI +  +C    L+H V  VGYG E    +G  +W+VKNSWG  WG  GY+++ ++     +  CGIA  ++Y
Sbjct:  131 NQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENS-AANVRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKD----WSNHCGIATYSTY 330          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.964e-36
Identity = 84/208 (40.38%), Postives = 112/208 (53.85%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCG-TSLDHGVTAVGYGTEN-----GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIA 598
            +QG CGSCW+FST   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL   A+ +II NGGI TE  YPY A  G+   +        I ++  +P N+       V+  P+++A +   + +Q Y  G+F   C   SLDHG+  VGY  +N        YWIVKNSWG+ WGE GYI + R         CG++
Sbjct:  135 NQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAAD--AVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG-----KNTCGVS 335          
BLAST of CX296792 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.872e-36
Identity = 79/183 (43.17%), Postives = 109/183 (59.56%), Query Frame = 2
Query:   20 DQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNV 565
            +QG+CG+CWAF+T+A+VE    +    LI LSEQ+L+DCD S + GCNGGL+  AFE I+  GG+ TE DYP+   +  C   R    VV+ +  Y  V +N+EK      A  P+ +AI+   +    Y  G+ +      L+H V  VGYG ENG  YW+ KN+WG  WGE GY R+ +NV
Sbjct:  161 NQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD-SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVN--YYRGVISSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNV 340          
The following BLAST results are available for this feature:
BLAST of CX296792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
CATL6_HUMAN1.857e-3848.10Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CPR1_DROME3.167e-3842.31Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATL_BRUPA1.204e-3744.06Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CYSP_TRYBB5.973e-3743.17Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CYSP1_MAIZE1.019e-3639.42Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATV_NPVST1.331e-3643.59Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_GVXN1.331e-3644.85Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
TEST2_RAT2.270e-3641.26Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CYSP1_DICDI2.964e-3640.38Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATV_NPVLD3.872e-3643.17Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]

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Properties
Property NameValue
Genbank descriptionC05802H04SK FerrChloL1 Citrus clementina cDNA clone C05802H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296792 ID=CX296792; Name=CX296792; organism=Citrus clementina; type=EST; length=754bp
GAGCTGTCGCTGAAGTTAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGAC
CGTCCCCTCCATCTCCAACAAGCCTCCTGCTGTGTGTGACAATTATTACT
CTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATGGTACTCTTG
CTTG
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