CX296801

Overview
NameCX296801
Unique NameCX296801
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.191e-31
Identity = 72/172 (41.86%), Postives = 103/172 (59.88%), Query Frame = 2
Query:   71 IDLYNVYAPLCKSS--APPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WSTCSD-LTWT----DSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWYKG-VIFTTVRGAGHLVPTYQPQRALIMISS 550
            +D+YN+YAPLC +S  +  P     I + DPCS  Y+ +YLN+ EVQ A+HA  T     W++C+  L W     D   ++ P +Q+L+  G+RV +Y+GD D  +P TS+   +  +NL V   W PW+  G VGG+   YKG + F TV+GAGH VPT QP  AL + +S
Sbjct:  300 LDIYNIYAPLCLNSTLSSEPKKCTTIMKADPCSGNYLKAYLNIKEVQEAIHANTTKIPYEWTSCNTKLLWEWNEKDRYVSLTPILQELMGKGVRVMLYNGDVDLVIPFTSTLAVVKTMNLTVVKEWRPWFTGGHVGGFTEDYKGNLTFVTVKGAGHSVPTDQPIHALNIFTS 471          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.244e-29
Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 2
Query:   47 QGVREFGQIDLYNVYAPLCKSSAPPPP--TAGVIREYDPCSDKYVNSYLNLAEVQAALHAK---HTNWSTCSDL---TWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWY-ADGEVGGYVLWYKG--VIFTTVRGAGHLVPTYQPQRALIMIS 547
            Q + EFG ID YN+ +P C + A       A   R  D C   Y   Y+N   V  + HA+    T W+ CS +    W DSP ++LP I+ L+ + +R+WI+SGD+D  +P++ +R+SINA+ L     WYPWY + G VGG+   Y+   + +TTVR AGH VP  QP+ AL + +
Sbjct:  272 QALSEFGDIDPYNINSPACTTHASSNEWMQAWRYRGNDECVVGYTRKYMNDPNVHKSFHARLNGSTPWTPCSRVIRKNWKDSPKSMLPIIKNLLQAHLRIWIFSGDSDAVLPLSGTRHSINAMKLKSSKRWYPWYHSHGLVGGWSQVYEDGLLTYTTVRAAGHEVPLSQPRLALFLFT 449          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.438e-29
Identity = 63/172 (36.63%), Postives = 98/172 (56.98%), Query Frame = 2
Query:   71 IDLYNVYAPLCKSS--APPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WSTCS---DLTWTDSP--STVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWY-KGVIFTTVRGAGHLVPTYQPQRALIMISS 550
            +D+YN+YAP+C +S  +  P     I E DPC   YV +YLN   VQ A+HA  T     W  C+   +  W D+   ++++P +  L+  G+RV +YSGD D  +P T++   +  +NL V   W PW+  G++GG+   Y + + + TV+G+GH VP  QP  AL + +S
Sbjct:  305 LDVYNIYAPVCLNSTLSSEPKKCTTIMEVDPCRSNYVKAYLNSENVQEAMHANTTKLPYEWKACNHYLNSVWIDADKDASMVPILHDLMGEGVRVLVYSGDVDAAIPFTATMAVLKTMNLTVVNEWRPWFTGGQLGGFTEDYERNLTYATVKGSGHSVPLDQPVHALNLFTS 476          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.043e-27
Identity = 63/173 (36.42%), Postives = 106/173 (61.27%), Query Frame = 2
Query:   68 QIDLYNVYAPLCKSSAPPPPT-----AGVIREYDPCSDKYVNSYLNLAEVQAALHAK---HTNWSTCSDLT---W--TDSPSTVLPTIQQLIASG-IRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWYKGVI-FTTVRGAGHLVPTYQPQRALIM 541
            +++LYN+  P C ++   P T        + +Y+PC  +Y+ +YLN  +VQ ++H     HT W  C++ T   W  TD  +++LP +++L+    +RVW+Y+GDTD  +P+T + +++  +NL   T W PW+++G+VGG+   YKG   + TV GAGH VP Y+P+ AL +
Sbjct:  316 KMNLYNILTPTCINATLTPLTNQSKECTTVLQYEPCGMQYIAAYLNREDVQRSMHVTKLPHT-WMLCNEATGFNWNQTDYSASMLPILKELMKHDQLRVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEYKGNFRYATVIGAGHEVPLYKPKAALTL 487          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.043e-27
Identity = 67/172 (38.95%), Postives = 102/172 (59.30%), Query Frame = 2
Query:   71 IDLYNVYAPLCKSSAPP--PPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WSTCS-DLT--WT--DSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWYKG-VIFTTVRGAGHLVPTYQPQRALIMISS 550
            +D YN+YAP+C +S           + E DPCS  Y+ +YLN  +VQ A+HA  T     W++C+ +LT  W+  D  + ++P + +L+  G+RV IY+GD D  +P  S+   +  +NL V   + PW+  G++GG+   YKG + F TV+GAGH VPT QP  AL + +S
Sbjct:  305 LDTYNIYAPVCLNSTLSRISKKCTTVLEVDPCSKDYLKAYLNRKKVQKAIHANTTKLPYEWTSCNNELTENWSENDRDTPMIPILHELMGEGVRVMIYNGDVDLEIPFASTLAVVKEMNLTVVKEFRPWFTGGQLGGFTEDYKGNLTFVTVKGAGHSVPTDQPIHALNIFTS 476          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.489e-21
Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 2
Query:  152 DPCSDKYVNSYLNLAEVQAALHAKHTN----WSTCSDLT---WTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSI----NALNLPVETAWYPWYADGEVGGYVLWYKGVI-FTTVRGAGHLVPTYQPQRALIMISS 550
            D C       YLNL EVQ ALHA  T     WS CS L    +TD  + +LP +++++ S + VW++SGD D  +P+  SR  +    + LN      +  W+  G+VGG+V+ Y  ++ F TVRGA H+VP  QP RAL + +S
Sbjct:  318 DVCMSFEEQLYLNLPEVQKALHANRTKLPYEWSMCSSLLNYKYTDGNANMLPILKRIVKSKVPVWVFSGDEDSVIPLLGSRTLVKELADDLNFNTTVPYGAWFDKGQVGGWVVEYGNLLTFATVRGAAHMVPYSQPSRALHLFTS 462          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18
Identity = 62/186 (33.33%), Postives = 90/186 (48.39%), Query Frame = 2
Query:   50 GVREFGQIDLYNVYAPLC--------KSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN---WSTCSDLTWTDSPSTVLPTIQ---QLIASGIRVWIYSGDTDGRVPVTSSRYSI----NALNLPVETAWYPWYADGEVGGYVLWYKGVI-FTTVRGAGHLVPTYQPQRALIMISS 550
            G+     ID Y+V   +C        K  +P P   G     D C +    +YLN  +VQ ALHA+      W+ CSD+   +     +PTI     L+ +G+ V++YSGD D  +P+T SR  +      L L     +  W+A  +VGG+   Y   + F TVRGA H VP  QP RAL++  +
Sbjct:  271 GIETSRFIDKYDVTLDVCIPSVLSQSKVVSPQPQQVG--ETVDVCLEDETVNYLNRRDVQKALHARLVGTRKWTVCSDVLDYEVLDVEVPTINIVGSLVKAGVPVFVYSGDQDSVIPLTGSRTLVKRLAEELGLRTTVPYRVWFAGQQVGGWTQVYGNTLAFATVRGAAHEVPFSQPARALVLFKA 454          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.739e-18
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  155 PC-SDKYVNSYLNLAEVQAALHAKHTN----WSTCSD-LTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWYK-GVIFTTVRGAGHLVPTYQPQRALIMIS 547
            PC SD+   ++LN  +V+AA+HA+  +    W  C++ L +     +++   + L   G R +IYSGD D  VP T +     +L   V  +W PW+ +G+V GY   Y+ G+ F T++GAGH VP Y+PQ +L   S
Sbjct:  365 PCMSDEVATAWLNNDDVRAAIHAQPVSSIGSWLICTNVLDFIHDAGSMISYHKNLTGQGYRAFIYSGDHDMCVPYTGTEAWTRSLGYGVIDSWRPWHLNGQVSGYTQGYEHGLTFATIKGAGHTVPEYKPQESLAFYS 502          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.279e-17
Identity = 56/145 (38.62%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  152 DPCSDKYVNSYLNLAEVQAALHAKHTN----WSTCSD-LTWTDSPSTV--LPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINAL----NLPVETAWYPWYADGEVGGYVLWY-KGVIFTTVRGAGHLVPTYQPQRALIMISS 550
            D C       Y NL EVQ ALHA  T+    WS CS  L ++D    +  LP ++++I +   +WI+SGD D  VP   SR  +  L    N      +  W+   +VGG+ + Y K + F TVRGA H+VP  QP RAL + SS
Sbjct:  312 DVCMTYERRFYFNLPEVQKALHANRTHLPYSWSMCSGVLNYSDIDGNIDMLPILKRIILNKTPIWIFSGDQDSVVPFGGSRTLVRELAQDLNFKTTVPYGAWFHKSQVGGWAIEYGKLLTFATVRGAAHMVPYAQPSRALHLFSS 456          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.181e-17
Identity = 56/145 (38.62%), Postives = 79/145 (54.48%), Query Frame = 2
Query:  152 DPCSDKYVNSYLNLAEVQAALHAKHTN----WSTCSDL---TWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSI----NALNLPVETAWYPWYADGEVGGYVLWYKGVI-FTTVRGAGHLVPTYQPQRALIMISS 550
            D C +     YLN+ EVQ ALHA  TN    WS CS+L   +  D  + +LPT++++I + I V I+SGD D  VP   +R  +    N LN      +  W+   +VGG+ + Y  ++ F TVRGA H V   QP RAL + S+
Sbjct:  308 DVCMNYERQFYLNIPEVQMALHANRTNLPYSWSLCSNLLNYSAIDVNTNMLPTLKRIIQNKIPVRIFSGDQDSVVPFLGTRTIVGELANDLNFKTTVPYGVWFHKRQVGGWAIEYGNLLTFATVRGAAHAVAYTQPSRALHLFST 452          
The following BLAST results are available for this feature:
BLAST of CX296801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
SCP36_ARATH1.191e-3141.86Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP28_ARATH3.244e-2939.33Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP38_ARATH9.438e-2936.63Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP39_ARATH1.043e-2736.42Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP37_ARATH1.043e-2738.95Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP44_ARATH2.489e-2139.31Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP46_ARATH2.576e-1833.33Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
CBP1_ORYSJ5.739e-1836.23Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
SCP42_ARATH1.279e-1738.62Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP41_ARATH2.181e-1738.62Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC05803A01SK FerrChloL1 Citrus clementina cDNA clone C05803A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296801 ID=CX296801; Name=CX296801; organism=Citrus clementina; type=EST; length=551bp
CCGAATTCGGCACGAGGTTTCAACTTCGCGTGATCAATATCAAACTCAAG
GAGTTAGGGAGTTTGGACAGATTGATCTATACAACGTTTACGCTCCACTT
TGCAAATCATCAGCACCACCACCTCCAACAGCCGGCGTTATCAGAGAATA
TGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAACCTTGCCGAGG
TGCAAGCAGCTCTTCATGCGAAACATACCAACTGGTCAACTTGCAGCGAC
TTGACATGGACCGACAGCCCATCAACTGTGCTTCCAACAATACAGCAGCT
GATAGCAAGTGGAATTAGGGTGTGGATATACAGCGGCGACACAGATGGGC
GAGTTCCAGTGACATCCTCTAGATACTCCATCAATGCTCTGAACCTTCCG
GTTGAAACTGCTTGGTACCCATGGTACGCTGATGGTGAGGTTGGTGGATA
TGTGCTCTGGTACAAGGGAGTGATATTCACCACTGTTAGAGGGGCAGGGC
ATCTGGTTCCCACTTACCAGCCACAGCGAGCTCTCATCATGATCTCATCT
T
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