CX296801

Overview
NameCX296801
Unique NameCX296801
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 2.848e-17
Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 2
Query:  155 PC-SDKYVNSYLNLAEVQAALHAKHTN----WSTCSD-LTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWYK-GVIFTTVRGAGHLVPTYQPQRALIMIS 547
            PC SD+   ++L+ A V++A+HA+  +    W  C+D L +     +++   + L + G R  I+SGD D  VP T S     +L   V  +W PW  +G+V GY   Y+ G+ F T++GAGH VP Y+PQ A    S
Sbjct:  354 PCMSDEVATAWLDNAAVRSAIHAQSVSAIGPWLLCTDKLYFVHDAGSMIAYHKNLTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWITNGQVSGYTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYS 491          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.720e-17
Identity = 58/177 (32.77%), Postives = 88/177 (49.72%), Query Frame = 2
Query:   71 IDLYNVYAPLC------KSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN---WSTCSDLTWTDSPSTVLPTIQ---QLIASGIRVWIYSGDTDGRVPVTSSRYSIN----ALNLPVETAWYPWYADGEVGGYVLWYKGVI-FTTVRGAGHLVPTYQPQRALIMISS 550
            +D Y+V   +C      +S    P   G     D C +    +YLN  +VQ ALHA+      W+ CS++         +PTI     L+ +G+ V +YSGD D  +P+T SR  ++     L L     +  W+A  +VGG+   Y  V+ F TVRGA H VP  QP+R+L++  +
Sbjct:  276 VDKYDVTLDVCIPSVLSQSKVVSPNQVG--ESVDVCVEDETVNYLNRRDVQEALHARLIGVREWTVCSNVLDYQLLDVEIPTINIVGSLVKAGVPVLVYSGDQDSVIPLTGSRTLVSRLAKQLGLRTSVPYRVWFAGQQVGGWTQVYGNVLSFATVRGASHEVPFSQPERSLVLFKA 450          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.666e-15
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = 2
Query:  155 PCSDKYV-NSYLNLAEVQAALHAKHT----NWSTCS-DLTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWY-KGVIFTTVRGAGHLVPTYQPQRAL 535
            PC D  V   +LN   V+ A+HAK      NW  CS +L +     +++   + L  SG R  I+SGD D  VP T S     A+   V   W PW ++ +V G+   Y   + F T++GAGH VP Y+P+ +L
Sbjct:  349 PCIDDTVATKWLNDPAVRKAVHAKEEKAIGNWELCSSNLEYRHDTGSMIEYHRNLTLSGFRALIFSGDHDMCVPYTGSEAWTKAMGYKVVDEWRPWMSNNQVAGFTQGYANNLTFLTIKGAGHTVPEYKPRESL 482          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.547e-15
Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  152 DPCSDKYVNSYLNLAEVQAALHAKHTN----WSTCSD---LTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINA----LNLPVETAWYPWYADGEVGGYVLWYKGVI-FTTVRGAGHLVPTYQPQRALIMISS 550
            D C    V   L L ++ A LHA  T     W+ CS+    +  D    +LP+++++I +   VWI+SGD D  +P+ SSR  +      LN      +  W+   +VGG+V  Y  ++ F TVRGA H+VP  +P RAL M SS
Sbjct:  280 DVCYPSIVQQELRLKKMNA-LHANRTRLPYEWTMCSNRLNYSGIDGYIDMLPSLKRIIQNQTPVWIFSGDQDSVIPLQSSRTLVRELAEDLNFKTTIPYGAWFHKEQVGGWVTEYGNLLTFATVRGAAHMVPYAEPSRALHMFSS 423          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.939e-15
Identity = 47/134 (35.07%), Postives = 69/134 (51.49%), Query Frame = 2
Query:  155 PC-SDKYVNSYLNLAEVQAALHAKHTN----WSTCSD-LTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWY-KGVIFTTVRGAGHLVPTYQPQRAL 535
            PC  D+   ++LN  E++ A+H K  +    W  CS  L++     +++   + L  SG R  IYSGD D  VP T S     +L   V   W  W ++ +V GY   Y   + F T++GAGH VP Y+P+ AL
Sbjct:  352 PCIDDRVATAWLNDPEIRKAIHTKEESEIGRWELCSGKLSFYHDAGSMIDFHRNLTLSGYRALIYSGDHDMCVPFTGSEAWTKSLGYKVIDEWRAWISNDQVAGYTQGYANNLTFLTIKGAGHTVPEYKPREAL 485          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.559e-13
Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 2
Query:   89 YAPLCKSSAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKH-----TNWSTCSDL-TWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGE----VGGYVLWY----KGVIFTTVRGAGHLVPTYQPQRALIMISS 550
            +AP  ++ AP  P   + +            Y    +VQ AL  +        W+ C+ +  +T   ST+LP   +L+   IR+ +YSGDTD  V    ++ +I+ L L   ++W  W  D      VGGY+  +    KG+ F TVRGAGH+VP  +P  A  M  +
Sbjct:  321 FAPRFETDAPCVPNQSIAK------------YFRRLDVQQALGVRRKTADPNGWNICTGIINYTQVYSTILPFYAKLLPH-IRILVYSGDTDMVVNGLGTQAAIDKLQLQETSSWRTWEFDSALGTVVGGYIRKFEKSGKGLTFITVRGAGHMVPLVKPDSAFYMFKN 475          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 43/145 (29.66%), Postives = 71/145 (48.97%), Query Frame = 2
Query:  104 KSSAPPPPTAGVIREYDPC-SDKYVNSYLNLAEVQAALHAKHT--NWSTCSD---LTWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWYKGVIFTTVRGAGHLVPTYQ 520
            KS +  P  A V     PC +D  + SY+N  +V+ A+H       W  CSD    T+    + + P I++++ + +RV +Y GDTD        +   + L L       PW  D ++ G+   + G+ F T+RGAGH+ P ++
Sbjct:  313 KSQSQKPLKADV-----PCLNDTEMLSYMNNPKVRKAIHIPFNLGKWDICSDKVTTTYQKQYTDMTPFIKKIVKNHVRVLLYYGDTDMACNFMMGQQFSDQLGLRRTLKKTPWKYDRQIAGFKTLFDGLSFITIRGAGHMAPQWR 452          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 59/196 (30.10%), Postives = 87/196 (44.39%), Query Frame = 2
Query:   44 TQGVREFGQIDLYNVYAPLCKSSAP---------------PPPTAGVIREYDPCSDKY-VNSYLNLAEVQAALHAKHT--NWSTCSDLT-------WTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYADGEVGGYVLWYKG--VIFTTVRGAGHLVPTYQPQRALIMISS 550
            TQ     G ++ YN+YA    +SA                 P   G +    PC D+  V +YLN  +V+ AL    +   WS CS+         + D  S VL  +     + +++ +Y+GD D        +   + L L +      +   G++GGYV  YKG  V F TVRGAGH+VPT +P  A  +I S
Sbjct:  259 TQQTAWNGGLNPYNMYADCISTSASFRFGMEYERRFNKKYTPEVLGTV----PCLDESPVTNYLNRQDVRKALGIPSSLPAWSICSNAISYGYKRQYGDMTSRVLNAVNN---NNLKMMLYNGDVDLACNALMGQRFTDKLGLTLSKKKTHFTVKGQIGGYVTQYKGSQVTFATVRGAGHMVPTDKPAVAEHIIQS 447          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 45/135 (33.33%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  182 YLNLAEVQAALHAKHT--NWSTCSDLTWTDSPST---VLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPV----ETAWYPWYADGEVGGYVLWYK-----GVIFTTVRGAGHLVPTYQPQRALIMI 544
            YLN A+V+ +LH   +   W  CSD    +   T   V+P  Q +IA+GI++ +Y+GD D       ++  + +LNL V    E     W+  G+ G  V  ++      V F TVRG+GH VP  +P+ +  MI
Sbjct:  321 YLNRADVRKSLHIPSSLPAWEECSDQVGKNYVVTHFNVIPEFQTMIAAGIKILVYNGDVDTACNSIMNQQFLTSLNLTVLGEQEKVNEAWHYSGQTGTAVAGFQTKFAGNVDFLTVRGSGHFVPEDKPKESQQMI 455          
BLAST of CX296801 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 47/143 (32.87%), Postives = 68/143 (47.55%), Query Frame = 2
Query:  155 PCSDKYVNS-YLNLAEVQAALHAKHT--NWSTCSDLTWTDS----PSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYAD-GEVG----GYVLWYKGVIFTTVRGAGHLVPTYQPQRALIMIS 547
            PC++    S YLN   V+ ALH       W  C+ L          S     ++ L A   R+ +Y+GD D         + +++LN  +E    PW  D GE G    G+V  +  + F T++GAGH+VPT +PQ AL M S
Sbjct:  329 PCTNTTAASNYLNDPHVRKALHIPEQLPRWDLCNFLVNIQYRRLYQSMCSQYLKLLSAQKYRILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPQAALTMFS 471          
The following BLAST results are available for this feature:
BLAST of CX296801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CBP1_HORVU2.848e-1736.23Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP45_ARATH3.720e-1732.77Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP21_ARATH2.666e-1535.82Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP43_ARATH4.547e-1535.86Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP20_ARATH5.939e-1535.07Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
NF314_NAEFO5.559e-1330.95Virulence-related protein Nf314 OS=Naegleria fowle... [more]
YUW5_CAEEL3.984e-1129.66Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
YUA6_CAEEL5.203e-1130.10Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
YSS2_CAEEL5.203e-1133.33Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
PPGB_BOVIN8.875e-1132.87Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]

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Properties
Property NameValue
Genbank descriptionC05803A01SK FerrChloL1 Citrus clementina cDNA clone C05803A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296801 ID=CX296801; Name=CX296801; organism=Citrus clementina; type=EST; length=551bp
CCGAATTCGGCACGAGGTTTCAACTTCGCGTGATCAATATCAAACTCAAG
GAGTTAGGGAGTTTGGACAGATTGATCTATACAACGTTTACGCTCCACTT
TGCAAATCATCAGCACCACCACCTCCAACAGCCGGCGTTATCAGAGAATA
TGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAACCTTGCCGAGG
TGCAAGCAGCTCTTCATGCGAAACATACCAACTGGTCAACTTGCAGCGAC
TTGACATGGACCGACAGCCCATCAACTGTGCTTCCAACAATACAGCAGCT
GATAGCAAGTGGAATTAGGGTGTGGATATACAGCGGCGACACAGATGGGC
GAGTTCCAGTGACATCCTCTAGATACTCCATCAATGCTCTGAACCTTCCG
GTTGAAACTGCTTGGTACCCATGGTACGCTGATGGTGAGGTTGGTGGATA
TGTGCTCTGGTACAAGGGAGTGATATTCACCACTGTTAGAGGGGCAGGGC
ATCTGGTTCCCACTTACCAGCCACAGCGAGCTCTCATCATGATCTCATCT
T
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